RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TMEM120AQ9BXJ8 343 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 MIS12Q9H081 205 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 DNAAF2Q9NVR5 837 aaKnown RBP17.22■□□□□ 0.35
GPC1-201ENST00000264039 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 PHBP35232 272 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 SEPT6Q14141 434 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 DDB1Q16531 1140 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 CNPY1Q3B7I2 92 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 SLC44A4Q53GD3 710 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 CENPUQ71F23 418 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 TTC7BQ86TV6 843 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 PRPF39Q86UA1 669 aaKnown RBP17.22■□□□□ 0.35
GPC1-201ENST00000264039 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 TRIM42Q8IWZ5 723 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 CADM1Q9BY67 442 aaKnown RBP17.22■□□□□ 0.35
GPC1-201ENST00000264039 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 LNPEPQ9UIQ6 1025 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 LBRQ14739 615 aaKnown RBP17.21■□□□□ 0.35
GPC1-201ENST00000264039 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CYFIP1Q7L576 1253 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 BBOF1Q8ND07 529 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 ANKRD27Q96NW4 1050 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 PARVGQ9HBI0 331 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 PDXKO00764 312 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 PDE5AO76074 875 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 RRM1P23921 792 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 GSTO1P78417 241 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
GPC1-201ENST00000264039 EPHA7Q15375 998 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 HSP90AA5PQ58FG0 334 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 INPP5DQ92835 1189 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
GPC1-201ENST00000264039 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
GPC1-201ENST00000264039 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 BGNP21810 368 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 AMPD1P23109 780 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
GPC1-201ENST00000264039 PARP6Q2NL67 630 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 ICA1LQ8NDH6 482 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 USP6NLQ92738 828 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CFAP36Q96G28 342 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 PPP1R36Q96LQ0 422 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 CNBD2Q96M20 576 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 MAD1L1Q9Y6D9 718 aa17.21■□□□□ 0.35
GPC1-201ENST00000264039 ADCY3O60266 1144 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 VCAM1P19320 739 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 RASA2Q15283 850 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 CLNKQ7Z7G1 428 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 SCUBE1Q8IWY4 988 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 PPM1NQ8N819 430 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 TCP10LQ8TDR4 215 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 ANO3Q9BYT9 981 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
GPC1-201ENST00000264039 C10orf88Q9H8K7 445 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 RMI1Q9H9A7 625 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 E7ENQ6 273 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 ZBTB39O15060 712 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 KRT1P04264 644 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 TAL1P17542 331 aaPredicted RBP17.2■□□□□ 0.34
GPC1-201ENST00000264039 SSTR1P30872 391 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 RFC1P35251 1148 aaPredicted RBP17.2■□□□□ 0.34
GPC1-201ENST00000264039 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
GPC1-201ENST00000264039 ZYXQ15942 572 aaKnown RBP17.2■□□□□ 0.34
GPC1-201ENST00000264039 TBC1D25Q3MII6 688 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 GRAMD4Q6IC98 578 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 CASC4Q6P4E1 433 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 C3orf62Q6ZUJ4 267 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 TRAPPC9Q96Q05 1148 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 FCHO1O14526 889 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 TUBB6Q9BUF5 446 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
GPC1-201ENST00000264039 ETS1P14921 441 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 GRIP2Q9C0E4 1043 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 ATXN10Q9UBB4 475 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 A0A0A6YYK5 440 aaPredicted RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
GPC1-201ENST00000264039 COPEO14579 308 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 GSC2O15499 205 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 HIC1Q14526 733 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 GALNTL6Q49A17 601 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LIN52Q52LA3 116 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LIN9Q5TKA1 542 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 LPCAT4Q643R3 524 aa17.19■□□□□ 0.34
GPC1-201ENST00000264039 PHC3Q8NDX5 983 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms