RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 UNC93B1Q9H1C4 597 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 HAUS2Q9NVX0 235 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 GTF2IRD1Q9UHL9 959 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 SMIM35A0A1B0GVV1 85 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 ENO4A6NNW6 628 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 N4BP3O15049 544 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 ZMYND10O75800 440 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 SMNDC1O75940 238 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 AKAP3O75969 853 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 EDN1P05305 212 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 HSPA8P11142 646 aaKnown RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 MYBPC2Q14324 1141 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 RUFY4Q6ZNE9 571 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 MFN1Q8IWA4 741 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 NSMCE1Q8WV22 266 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 FAM49AQ9H0Q0 323 aaPredicted RBP20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 IFT122Q9HBG6 1241 aa20.28■□□□□ 0.84
COL4A3BP-201ENST00000261415 ITIH6Q6UXX5 1313 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 A0A087WZ62 844 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 SLC16A3O15427 465 aaKnown RBP20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 DNAJC8O75937 253 aaPredicted RBP20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 ADSSP30520 456 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 PBX1P40424 430 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 ACLYP53396 1101 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 POU5F1BQ06416 359 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 ANKRD20A8PQ5CZ79 823 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 RNPC3Q96LT9 517 aaKnown RBP20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 FDXACB1Q9BRP7 624 aaPredicted RBP20.27■□□□□ 0.84
COL4A3BP-201ENST00000261415 PIGRP01833 764 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 MDH1P40925 334 aaKnown RBP20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 PHKA2P46019 1235 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 LIG4P49917 911 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 ATP1A2P50993 1020 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 GPC3P51654 580 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 MAPK6Q16659 721 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 TBC1D25Q3MII6 688 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 CAGE1Q8TC20 777 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 CAVIN3Q969G5 261 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 PCIF1Q9H4Z3 704 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 USP20Q9Y2K6 914 aa20.27■□□□□ 0.83
COL4A3BP-201ENST00000261415 TEX33O43247 280 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 ATP6V1G2O95670 118 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 FAM47CQ5HY64 1035 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 MIIPQ5JXC2 388 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 SLC30A9Q6PML9 568 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 IFNLR1Q8IU57 520 aaPredicted RBP20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 MKNK1Q9BUB5 465 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 NOC4LQ9BVI4 516 aaKnown RBP20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 MINDY3Q9H8M7 445 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 NOD2Q9HC29 1040 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 PAK6Q9NQU5 681 aaPredicted RBP20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 HSPBP1Q9NZL4 362 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 C15orf41Q9Y2V0 281 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 ANK1P16157 1881 aa20.26■□□□□ 0.83
COL4A3BP-201ENST00000261415 MOXD2PA6NHM9 499 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 LGALS16A8MUM7 142 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 EXOC3O60645 756 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 CABYRO75952 493 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 PRKCBP05771 671 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 CASP14P31944 242 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 NLRP11P59045 1033 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 MTFR1Q15390 333 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 MAN2A1Q16706 1144 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 GDF6Q6KF10 455 aaPredicted RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 FRMD5Q7Z6J6 570 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 MMGT1Q8N4V1 131 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 NLRP7Q8WX94 980 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 TSEN34Q9BSV6 310 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 ABL1P00519 1130 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 GHRP10912 638 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 PSMC2P35998 433 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 ITIH3Q06033 890 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 TMEM62Q0P6H9 643 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 RIPK1Q13546 671 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 TRIM59Q8IWR1 403 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 XXYLT1Q8NBI6 393 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 CYFIP2Q96F07 1278 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 TARS2Q9BW92 718 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 FZD8Q9H461 694 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 CHCHD3Q9NX63 227 aaKnown RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 ARMCX3Q9UH62 379 aaPredicted RBP20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 FRMD4BQ9Y2L6 1034 aa20.25■□□□□ 0.83
COL4A3BP-201ENST00000261415 NR1D1P20393 614 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 SCTRP47872 440 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 GUCY1A3Q02108 690 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 GLE1Q53GS7 698 aaKnown RBP20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 FAM186BQ8IYM0 893 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ARFGAP2Q8N6H7 521 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 ARRDC4Q8NCT1 418 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
COL4A3BP-201ENST00000261415 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms