RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 C3orf20Q8ND61 904 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 P3H4Q92791 437 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 POLR3CQ9BUI4 534 aaPredicted RBP12.71□□□□□ -0.37
USHBP1-201ENST00000252597 KIAA1683Q9H0B3 1180 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 KCNH7Q9NS40 1196 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 ADAM22Q9P0K1 906 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 SLC12A4Q9UP95 1085 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
USHBP1-201ENST00000252597 BAG2O95816 211 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 KRT1P04264 644 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 CETN2P41208 172 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 PEX5P50542 639 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 POLE2P56282 527 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 CRYMQ14894 314 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 Q4G0T1 1027 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 WDR44Q5JSH3 913 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 SH3BP5LQ7L8J4 393 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 TEX2Q8IWB9 1127 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 DAW1Q8N136 415 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 LRRN4Q8WUT4 740 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 ART4Q93070 314 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.38
USHBP1-201ENST00000252597 A1CFQ9NQ94 594 aaKnown RBP12.71□□□□□ -0.38
USHBP1-201ENST00000252597 MARCOQ9UEW3 520 aaPredicted RBP12.71□□□□□ -0.38
USHBP1-201ENST00000252597 IGKV6D-41A0A0C4DH26 115 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 GTPBP10A4D1E9 387 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 PIK3R2O00459 728 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 NFIBO00712 420 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 TRMT10CQ7L0Y3 403 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CEP170P1Q96L14 293 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 OSBPL8Q9BZF1 889 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 BRWD3Q6RI45 1802 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CCDC195A0A1B0GUA6 201 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CDH16O75309 829 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 ZBTB48P10074 688 aaPredicted RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CNGA1P29973 690 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 BIRC2Q13490 618 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 KRT39Q6A163 491 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 BORCS6Q96GS4 357 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 TMEM121Q9BTD3 319 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 AAASQ9NRG9 546 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 RAB20Q9NX57 234 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 PCDHA3Q9Y5H8 950 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 KAT6AQ92794 2004 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 TBX3O15119 743 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 ZBED4O75132 1171 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 KRT4P19013 534 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 SSTR1P30872 391 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 YWHABP31946 246 aaKnown RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 NRLP54845 237 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 OSTNP61366 133 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 KIF22Q14807 665 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 EFTUD2Q15029 972 aaKnown RBP eCLIP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 AOC3Q16853 763 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 LRRC36Q1X8D7 754 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 TAF1BQ53T94 588 aaPredicted RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 HIPK4Q8NE63 616 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 ATL2Q8NHH9 583 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CENPTQ96BT3 561 aa12.7□□□□□ -0.38
USHBP1-201ENST00000252597 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
USHBP1-201ENST00000252597 CYP3A7-CYP3A51PA0A087WV96 503 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 KIF1CO43896 1103 aaKnown RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CD19P15391 556 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TCF4P15884 667 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 ITIH2P19823 946 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CCND1P24385 295 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CYP3A7P24462 503 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TAS2R40P59535 323 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 FBXL13Q8NEE6 735 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
USHBP1-201ENST00000252597 MKNK1Q9BUB5 465 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TRAIPQ9BWF2 469 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TXLNGYQ9BZA5 131 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 RXFP1Q9HBX9 757 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
USHBP1-201ENST00000252597 CNOT7Q9UIV1 285 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms