RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MOV10L1Q9BXT6 1211 aaKnown RBP12.23□□□□□ -0.45
SOX9-201ENST00000245479 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 ZWILCHQ9H900 591 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 C1orf112Q9NSG2 853 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 COL20A1Q9P218 1284 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SRRM3A6NNA2 597 aaPredicted RBP12.23□□□□□ -0.45
SOX9-201ENST00000245479 ANKRD63C9JTQ0 380 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 CYP3A4P08684 503 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
SOX9-201ENST00000245479 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 FRMD5Q7Z6J6 570 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 RIPK3Q9Y572 518 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 ZCCHC18P0CG32 403 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 CNGA1P29973 690 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 NSFP46459 744 aaKnown RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 IRX4P78413 519 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 KYNUQ16719 465 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 NME8Q8N427 588 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 ZNF564Q8TBZ8 553 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 STRCP1A6NGW2 1772 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 TRPA1O75762 1119 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 WEE2P0C1S8 567 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 KRT10P13645 584 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 PHBP35232 272 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 ERMARDQ5T6L9 678 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 IRF2BP2Q7Z5L9 587 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 EGFL6Q8IUX8 553 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 PIP4K2CQ8TBX8 421 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 TARS2Q9BW92 718 aaKnown RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 WNT10BO00744 389 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 GRAP2O75791 330 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 P4HBP07237 508 aaKnown RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 ATP4AP20648 1035 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 MAN1A1P33908 653 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 HOXD13P35453 343 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 TRPC3Q13507 836 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 LRRC36Q1X8D7 754 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 CHADLQ6NUI6 762 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 DTNBP1Q96EV8 351 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 KLF6Q99612 283 aaPredicted RBP12.22□□□□□ -0.45
SOX9-201ENST00000245479 ERVK-5Q9HDB9 667 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 SAYSD1Q9NPB0 183 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 RHBDL2Q9NX52 303 aa12.22□□□□□ -0.45
SOX9-201ENST00000245479 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 GJB1P08034 283 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 PLS3P13797 630 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 GAP43P17677 238 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
SOX9-201ENST00000245479 LIN9Q5TKA1 542 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 MYH6P13533 1939 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 K7ERI5 159 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 SHBGP04278 402 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 VHLP40337 213 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 TMEM62Q0P6H9 643 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 EPHA7Q15375 998 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 ATP13A4Q4VNC1 1196 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
SOX9-201ENST00000245479 ANGEL2Q5VTE6 544 aaKnown RBP12.21□□□□□ -0.45
SOX9-201ENST00000245479 TMEM130Q8N3G9 435 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 CCDC89Q8N998 374 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 ACTRT1Q8TDG2 376 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 Q9H521 79 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 CHCHD3Q9NX63 227 aaKnown RBP12.21□□□□□ -0.45
SOX9-201ENST00000245479 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.45
SOX9-201ENST00000245479 C2CD2Q9Y426 696 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 COL18A1P39060 1754 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.45
SOX9-201ENST00000245479 RFC5P40937 340 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 RCN1Q15293 331 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 C1orf146Q5VVC0 180 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 PPP4R3CPQ6ZMV5 832 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 MFN1Q8IWA4 741 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 ALG3Q92685 438 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms