RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 RXRGP48443 463 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 VSNL1P62760 191 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CBX3Q13185 183 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 BLMHQ13867 455 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 KIAA0753Q2KHM9 967 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 EARS2Q5JPH6 523 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 FAAH2Q6GMR7 532 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ARMCX5Q6P1M9 558 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CMTR1Q8N1G2 835 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 CTNNBL1Q8WYA6 563 aaPredicted RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 RSPH1Q8WYR4 309 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 GOLGA1Q92805 767 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 HPS3Q969F9 1004 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CCDC74AQ96AQ1 378 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 SKA1Q96BD8 255 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ZNF669Q96BR6 464 aaPredicted RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 THAP11Q96EK4 314 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CLUHP3Q96NS8 147 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 WDR24Q96S15 920 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 RUFY1Q96T51 708 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 NUDT12Q9BQG2 462 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PDCD2LQ9BRP1 358 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 HERPUD2Q9BSE4 406 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 FAM167BQ9BTA0 163 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 UBP1Q9NZI7 540 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 WDR35Q9P2L0 1181 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PPT2Q9UMR5 302 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 C15orf41Q9Y2V0 281 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 C2CD2Q9Y426 696 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PCDHA8Q9Y5H6 950 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 DPPA5A6NC42 116 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 VSTM5A8MXK1 200 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 SPATA31C2B4DYI2 1134 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 WNT7AO00755 349 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 DHX15O43143 795 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 MGRN1O60291 552 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 NBNO60934 754 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 TPPPO94811 219 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 MMP1P03956 469 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 INHAP05111 366 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 TSPAN7P41732 249 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 SCTRP47872 440 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 NEK4P51957 841 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 GJA9P57773 515 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 GNGT1P63211 74 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 BAATQ14032 418 aaPredicted RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 GBX1Q14549 363 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CCDC92Q53HC0 331 aaPredicted RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 C1orf122Q6ZSJ8 110 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ARMCX2Q7L311 632 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CCDC50Q8IVM0 306 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 SLC7A5P1Q8MH63 180 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 C4orf32Q8N8J7 132 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ANKLE1Q8NAG6 615 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 GLIS3Q8NEA6 775 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PPHLN1Q8NEY8 458 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 ETNPPLQ8TBG4 499 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 GJA10Q969M2 543 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CCDC47Q96A33 483 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 RMDN2Q96LZ7 410 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 AIFM3Q96NN9 605 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CTAGE1Q96RT6 745 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 TARS2Q9BW92 718 aaKnown RBP3.93□□□□□ -1.78
UFM1-201ENST00000239878 SEZ6LQ9BYH1 1024 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 INIPQ9NRY2 104 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ZFATQ9P243 1243 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 RAB21Q9UL25 225 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PCDHA1Q9Y5I3 950 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 NFASCO94856 1347 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 DOCK5Q9H7D0 1870 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 HAS3O00219 553 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 TNPO2O14787 897 aaKnown RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 BUB1BO60566 1050 aaPredicted RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 ARIH2O95376 493 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 PGK2P07205 417 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 FAM153BP0C7A2 387 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 HARSP12081 509 aaKnown RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 KCNA2P16389 499 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 DESP17661 470 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ITGB5P18084 799 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 CCND3P30281 292 aaPredicted RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 SLC8A1P32418 973 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 SOX5P35711 763 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ARHGAP25P42331 645 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ZNF165P49910 485 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 PSMC1P62191 440 aaKnown RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 ARHGAP1Q07960 439 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 SPIRE1Q08AE8 756 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ORC2Q13416 577 aaPredicted RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 PLCB4Q15147 1175 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 TOMM20Q15388 145 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 CLPPQ16740 277 aaPredicted RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 MTERF2Q49AM1 385 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ZNF362Q5T0B9 420 aaPredicted RBP3.92□□□□□ -1.78
UFM1-201ENST00000239878 PPP4R3AQ6IN85 833 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 MZT2AQ6P582 158 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 NCCRP1Q6ZVX7 275 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms