RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PLA2G4BP0C869 781 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 MAPTP10636 758 aaKnown RBP16.4■□□□□ 0.22
UPK3A-201ENST00000216211 NBL1P41271 181 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 DTWD2Q8NBA8 298 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 FGF13Q92913 245 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 NTPCRQ9BSD7 190 aaKnown RBP16.4■□□□□ 0.22
UPK3A-201ENST00000216211 TBC1D17Q9HA65 648 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 CFAP54Q96N23 3096 aa16.4■□□□□ 0.22
UPK3A-201ENST00000216211 TOM1L1O75674 476 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 POU2F2P09086 479 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 SMTNP53814 917 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 ROR1Q01973 937 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
UPK3A-201ENST00000216211 ANGPT1Q15389 498 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 PABPC1LQ4VXU2 614 aaKnown RBP16.39■□□□□ 0.21
UPK3A-201ENST00000216211 ARSHQ5FYA8 562 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 VARS2Q5ST30 1063 aaKnown RBP16.39■□□□□ 0.21
UPK3A-201ENST00000216211 ARL6IP4Q66PJ3 421 aaKnown RBP16.39■□□□□ 0.21
UPK3A-201ENST00000216211 ASCL5Q7RTU5 278 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 TMEM130Q8N3G9 435 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
UPK3A-201ENST00000216211 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
UPK3A-201ENST00000216211 ARPP19P56211 112 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 GPC5P78333 572 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 SLC8B1Q6J4K2 584 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 ING5Q8WYH8 240 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 HAPLN2Q9GZV7 340 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 ARHGEF3Q9NR81 526 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 SLC2A4RGQ9NR83 387 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 KCND2Q9NZV8 630 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
UPK3A-201ENST00000216211 PRR23AA6NEV1 266 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 SYN3O14994 580 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 TBC1D4O60343 1298 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 ABLIM3O94929 683 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 CXCL8P10145 99 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 RPL9P32969 192 aaKnown RBP16.37■□□□□ 0.21
UPK3A-201ENST00000216211 MCM4P33991 863 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 NCKAP1LP55160 1127 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 SPAG1Q07617 926 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 MCL1Q07820 350 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 DHX8Q14562 1220 aaKnown RBP16.37■□□□□ 0.21
UPK3A-201ENST00000216211 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 LARP1BQ659C4 914 aaKnown RBP16.37■□□□□ 0.21
UPK3A-201ENST00000216211 ZPBP2Q6X784 338 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 MTSS1LQ765P7 747 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 RTL10Q7L3V2 364 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 NPAS3Q8IXF0 933 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 ZNF461Q8TAF7 563 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 BICD1Q96G01 975 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
UPK3A-201ENST00000216211 TUBGCP4Q9UGJ1 667 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 PATJQ8NI35 1801 aa16.37■□□□□ 0.21
UPK3A-201ENST00000216211 H7C4K7 107 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 CLDN3O15551 220 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 LRG1P02750 347 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 DCNP07585 359 aaKnown RBP16.36■□□□□ 0.21
UPK3A-201ENST00000216211 RHOP08100 348 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 ELF1P32519 619 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 TNFSF9P41273 254 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 MCM2P49736 904 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 MRPL58Q14197 206 aaKnown RBP16.36■□□□□ 0.21
UPK3A-201ENST00000216211 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 CTXN3Q4LDR2 81 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 PHLDB3Q6NSJ2 640 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 HAUS6Q7Z4H7 955 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 LRRC15Q8TF66 581 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 MCRS1Q96EZ8 462 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 AK8Q96MA6 479 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 KXD1Q9BQD3 176 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 KCNH3Q9ULD8 1083 aa16.36■□□□□ 0.21
UPK3A-201ENST00000216211 MRPS23Q9Y3D9 190 aaKnown RBP16.36■□□□□ 0.21
UPK3A-201ENST00000216211 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
UPK3A-201ENST00000216211 TCHHQ07283 1943 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 FANCMQ8IYD8 2048 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 ARHGEF37A1IGU5 675 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 PRRG1O14668 218 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 SEC24AO95486 1093 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 ATF2P15336 505 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 GRIN1Q05586 938 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
UPK3A-201ENST00000216211 POTEHQ6S545 545 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 DDX12PQ92771 950 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 REEP2Q9BRK0 252 aa16.35■□□□□ 0.21
UPK3A-201ENST00000216211 FOXQ1Q9C009 403 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms