RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 NOL6Q9H6R4 1146 aaKnown RBP10.98□□□□□ -0.65
VCL-201ENST00000211998 RPF1Q9H9Y2 349 aaKnown RBP10.98□□□□□ -0.65
VCL-201ENST00000211998 MKL2Q9ULH7 1088 aa10.98□□□□□ -0.65
VCL-201ENST00000211998 WDR19Q8NEZ3 1342 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 DNALI1O14645 258 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 RAD17O75943 681 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 KRT16P08779 473 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 HSPA1AP0DMV8 641 aaKnown RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 HSPA1BP0DMV9 641 aaKnown RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 GJA8P48165 433 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 RCAN1P53805 252 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 MTA3Q9BTC8 594 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 MXD3Q9BW11 206 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 BBS2Q9BXC9 721 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 DMGDHQ9UI17 866 aaKnown RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 RFX7Q2KHR2 1363 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 DGKIO75912 1065 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 ZNF18P17022 549 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 POU5F1BQ06416 359 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 ORC2Q13416 577 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 NAB2Q15742 525 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 TBCCQ15814 346 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 CDO1Q16878 200 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 CALML6Q8TD86 181 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 KCNB2Q92953 911 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 DYNLL2Q96FJ2 89 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 FUCA2Q9BTY2 467 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 APPL1Q9UKG1 709 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 AP3B1O00203 1094 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 MAP2K7O14733 419 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 FCER1AP12319 257 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 CCNHP51946 323 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 ERVK-24P63145 666 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 COASYQ13057 564 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 LRRC74BQ6ZQY2 392 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 TSHZ1Q6ZSZ6 1077 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 LUZP2Q86TE4 346 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 DCUN1D5Q9BTE7 237 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 SHCBP1LQ9BZQ2 653 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 PRKAG2Q9UGJ0 569 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 R3HDM2Q9Y2K5 976 aaKnown RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 NEU2Q9Y3R4 380 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 HEY1Q9Y5J3 304 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 C1orf232A0A0U1RR37 186 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 TSPAN9O75954 239 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 TSTA3Q13630 321 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 ANO4Q32M45 955 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 KIAA1841Q6NSI8 718 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 PASD1Q8IV76 773 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 NUP93Q8N1F7 819 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
VCL-201ENST00000211998 C11orf70Q9BRQ4 267 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 ASPSCR1Q9BZE9 553 aa10.97□□□□□ -0.65
VCL-201ENST00000211998 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 CALB2P22676 271 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 PI16Q6UXB8 463 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 YTHDF3Q7Z739 585 aaKnown RBP10.96□□□□□ -0.65
VCL-201ENST00000211998 STKLD1Q8NE28 680 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 GCOM2Q9BZD3 368 aaPredicted RBP10.96□□□□□ -0.65
VCL-201ENST00000211998 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 CYP26B1Q9NR63 512 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 TAF4O00268 1085 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 ANGPT2O15123 496 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 CLDN3O15551 220 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 MFN2O95140 757 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 FAM58BPP0C7Q3 252 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 MAGEA4P43358 317 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 SEMA3FQ13275 785 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 TFDP2Q14188 446 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 UBE2SQ16763 222 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 ARL13BQ3SXY8 428 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 PAPD7Q5XG87 772 aaKnown RBP10.96□□□□□ -0.65
VCL-201ENST00000211998 STRBPQ96SI9 672 aaKnown RBP10.96□□□□□ -0.65
VCL-201ENST00000211998 RAD21L1Q9H4I0 556 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 KIAA1586Q9HCI6 787 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.96□□□□□ -0.65
VCL-201ENST00000211998 PREX2Q70Z35 1606 aa10.96□□□□□ -0.65
VCL-201ENST00000211998 FKBP6O75344 327 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 RASSF9O75901 435 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 SOX5P35711 763 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 KBTBD12Q3ZCT8 623 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 B3GNT6Q6ZMB0 384 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 CCDC81Q6ZN84 652 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 CROCCP3Q8IVE0 287 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 ST13P5Q8NFI4 369 aaPredicted RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 RAD54LQ92698 747 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 INTS2Q9H0H0 1204 aaKnown RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.66
VCL-201ENST00000211998 PRR36Q9H6K5 1346 aa10.96□□□□□ -0.66
VCL-201ENST00000211998 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms