RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Cetn1P41209 172 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 NsfP46460 744 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Slc1a1P51906 523 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 YwhaeP62259 255 aaKnown RBP27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ddx4Q61496 702 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Lrrc1Q80VQ1 524 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Pi4kbQ8BKC8 816 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Vmn1r191Q8K4D0 298 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Syt5Q9R0N5 386 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Atp6v0a1Q9Z1G4 839 aaKnown RBP27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Tanc1Q0VGY8 1856 aa27.5■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Tap2P36371 702 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Hace1Q3U0D9 909 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ctc1Q5SUQ9 1212 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 EsrrbQ61539 433 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Cyp3a16Q64481 504 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Klhl17Q6TDP3 640 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 C6.1alQ7M757 291 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 AdalQ80SY6 360 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Naa15Q80UM3 865 aaKnown RBP27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Phka2Q8BWJ3 1235 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 VcpkmtQ8C436 228 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Fbxo16Q9QZM9 334 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Myo1eE9Q634 1107 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Krt13P08730 437 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 OgdhQ60597 1023 aaKnown RBP27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 A430089I19RikQ8C9W1 407 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Kct2Q8K201 259 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Fam13bQ8K2H3 851 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Fam133bQ9CVI2 245 aaKnown RBP27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Pdzd4Q9QY39 772 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Dnajc12Q9R022 198 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Cd97Q9Z0M6 818 aa27.49■■□□□ 1.99
Tpm1-216ENSMUST00000113707 EloblA6PWE0 161 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 PrphP15331 475 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ass1P16460 412 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Sh3bp2Q06649 559 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ppp4r3cQ3V0Y1 813 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Tdpoz2Q717B2 364 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Slc20a2Q80UP8 656 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ube2sQ921J4 223 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 MlklQ9D2Y4 472 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Spata31d1aE9QA35 1336 aa27.48■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ssxb10Q6XAR7 170 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Efl1Q8C0D5 1127 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Unc5bQ8K1S3 945 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 PhykplQ8R1K4 467 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Gm27029A2A4P4 543 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Oaz1P54369 227 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Pcbp1P60335 356 aaKnown RBP27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Fscn1Q61553 493 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Slc26a2Q62273 739 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Gigyf2Q6Y7W8 1291 aaKnown RBP27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Epn2Q8CHU3 595 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Arl2bpQ9D385 163 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Scgb2b12S4R2L0 112 aa27.47■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Gm6121L7MUF1 212 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ighmbp2P40694 993 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Mfhas1Q3V1N1 1048 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 E2f5Q61502 335 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Tcp10aQ80W76 438 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Tor4aQ8BH02 426 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Iqsec1Q8R0S2 961 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Xab2Q9DCD2 855 aaKnown RBP27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Chst7Q9EP78 484 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Cables1Q9ESJ1 568 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Gon4lQ9DB00 2260 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Arhgef10Q8C033 1345 aa27.46■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Gm8909G3UXE9 396 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Kpna6O35345 536 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Nr3c1P06537 783 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Olfr23Q7TRX4 325 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Pja2Q80U04 707 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Q8BGD0 127 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Ints6lQ8BND4 861 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 SfpqQ8VIJ6 699 aaKnown RBP27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Lman1Q9D0F3 517 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Leng1Q9DB98 261 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Scgb2b20Q9JI02 112 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 CenphQ9QYM8 241 aa27.45■■□□□ 1.99
Tpm1-216ENSMUST00000113707 Lrrc74aA0A1Y7VMD6 494 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Becn2P0DM65 447 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tnnc1P19123 161 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Hdhd2Q3UGR5 259 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Erich4Q3UNU4 136 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Rhbdf2Q80WQ6 827 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Pitpnm1O35954 1243 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Ap1m1P35585 423 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 GssP51855 474 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Cbx1P83917 185 aaKnown RBP27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Pou6f1Q07916 301 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Spink5Q148R4 1017 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Atp8b1Q148W0 1251 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Zbtb8osQ505B7 168 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Adam39Q7M762 756 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 LppQ8BFW7 613 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Q8C1R3 189 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Tldc1Q8K0P3 455 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Cpa5Q8R4H4 436 aa27.44■■□□□ 1.98
Tpm1-216ENSMUST00000113707 Q922R1 422 aa27.44■■□□□ 1.98
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms