RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 NvlQ9DBY8 855 aaKnown RBP8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 AllcQ9JHX6 414 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Grk1Q9WVL4 564 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Psmd10Q9Z2X2 231 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Abcb11Q9QY30 1321 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Myh11O08638 1972 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Arhgef37A1IGU4 676 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gm28043E0CXC2 719 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rpl21O09167 160 aaKnown RBP8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 CopeO89079 308 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Hoxd11P23813 323 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Psmd7P26516 321 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Mgat1P27808 447 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gbp8Q2V6D6 525 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Scaf8Q6DID3 1268 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Mxd3Q80US8 206 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Catsper3Q80W99 395 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ccdc113Q8C5T8 377 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Stxbp5Q8K400 1152 aaKnown RBP8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ssx2ipQ8VC66 615 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Foxp3Q99JB6 429 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Snf8Q9CZ28 258 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Trim54Q9ERP3 366 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Krt16Q9Z2K1 469 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Map3k15A2AQW0 1331 aa8.05□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gm5737A0A140LI11 423 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zscan4-ps3A0A1B0GRH6 506 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zscan4-ps2A0A1C7CYU6 506 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Tbc1d25A1A5B6 742 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Cyp2a22B2RXZ2 492 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gm8298J3QPI0 401 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Aak1Q3UHJ0 959 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ptk6Q64434 451 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Snap47Q8R570 413 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Unc45aQ99KD5 944 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Nacc2Q9DCM7 586 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Popdc2Q9ES82 367 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Cetn2Q9R1K9 172 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ggt5Q9Z2A9 573 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Bpifb9bA2AJD1 591 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Galntl6E5D8G1 601 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zfp651E9PZ11 729 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Trim34bJ3QNR8 485 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 1700122O11RikJ3QPW6 241 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 VdrP48281 422 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Cdc25aP48964 514 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Arl4cP61208 192 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Psg29Q3URN6 468 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 LrmpQ60664 539 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zcwpw1Q6IR42 630 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Sept9Q80UG5 583 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Usp6nlQ80XC3 819 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Bpifb9aQ80XI7 591 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Prpf31Q8CCF0 499 aaKnown RBP8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Slc35b4Q8CIA5 331 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Clic3Q9D7P7 237 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Iqcf1Q9D9K8 182 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Nrip2Q9JHR9 270 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rsbn1lD3Z0K6 821 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 AgxtO35423 414 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gsta4P24472 222 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Casp1P29452 402 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 GssP51855 474 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zbtb16Q3UQ17 673 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 OgdhQ60597 1023 aaKnown RBP8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Spa17Q62252 149 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 GnptabQ69ZN6 1235 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Otud6aQ6IE21 290 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Nyap1Q6PFX7 833 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Acap2Q6ZQK5 770 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ddx19bQ8BZY3 494 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Apol9bQ8C7I4 310 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Panx3Q8CEG0 392 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Zfp263Q8CF60 680 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Slc18a1Q8R090 521 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Apol9aQ8VDU3 310 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rad51cQ924H5 366 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Dynll2Q9D0M5 89 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Rad18Q9QXK2 509 aaKnown RBP8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Mtcl1Q3UHU5 1945 aa8.04□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Adamts6D3Z1A5 1117 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Wdr95D3Z7A8 784 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 PtproE9Q612 1226 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gm8257E9Q8R3 264 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Gm10250G3X9L6 160 aaKnown RBP8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Cdh5P55284 784 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Naa20P61600 178 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Nsun7Q14AW5 724 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Hmgb4Q6P8W9 181 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Atp6v1g3Q8BMC1 118 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ccdc151Q8BSN3 593 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Eif3bQ8JZQ9 803 aaKnown RBP8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Znf830Q8R1N0 363 aaKnown RBP8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Tmem98Q91X86 226 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Ttc1Q91Z38 292 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Pdia5Q921X9 517 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Dnaaf1Q9D2H9 634 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Efhc1Q9D9T8 648 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Atp5hQ9DCX2 161 aa8.03□□□□□ -1.12
Bdnf-209ENSMUST00000111050 Dgcr8Q9EQM6 773 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms