RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 SufuQ9Z0P7 484 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Atp6v0a1Q9Z1G4 839 aaKnown RBP22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gm10250G3X9L6 160 aaKnown RBP22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Prkaa1Q5EG47 559 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Q6GQU0 248 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rpa1Q8VEE4 623 aaKnown RBP22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Q9D1F3 157 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Atp5hQ9DCX2 161 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pdk2Q9JK42 407 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Hic1Q9R1Y5 733 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ifi206G3UZV2 921 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gucy2gQ6TL19 1100 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gm3893E9Q1I1 302 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gm8922F6XVS9 199 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Serpinb3aG3X9V8 387 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Scaf8Q6DID3 1268 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Tada2aQ8CHV6 443 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Trpc7Q9WVC5 862 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 GclmO09172 274 aaKnown RBP22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Scg3P47867 471 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Mif4gdQ3UBZ5 222 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Tll1Q62381 1013 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Wdr91Q7TMQ7 748 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Vipas39Q8BGQ1 491 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Lrrc8dQ8BGR2 859 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 CntrobQ8CB62 887 aa22.69■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Zfp839E9PUU5 921 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Mtco1P00397 514 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Krt4P07744 525 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rit2P70425 217 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rasip1Q3U0S6 961 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Afg1lQ3V384 480 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Flot2Q60634 428 aaKnown RBP22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Smyd3Q9CWR2 428 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Zscan4-ps3A0A1B0GRH6 506 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Zscan4-ps2A0A1C7CYU6 506 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gbp4A4UUI3 631 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Zfp212G3X8R7 492 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 MafgO54790 162 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ddx5Q61656 614 aaKnown RBP22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Med24Q99K74 987 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Abcf2Q99LE6 628 aaKnown RBP22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Trim12aQ99PQ1 284 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Neu2Q9JMH3 379 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Fxr2Q9WVR4 673 aaKnown RBP22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pbxip1Q3TVI8 727 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pacsin1Q61644 441 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 HpdlQ8K248 371 aa22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ddx39bQ9Z1N5 428 aaKnown RBP22.68■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pde6bP23440 856 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Cd86P42082 309 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Tmem145Q8C4U2 746 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Nr3c2Q8VII8 978 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Usp21Q9QZL6 566 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Cacna2d1O08532 1103 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Fgl2P12804 432 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Slc11a2P49282 568 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 NostrinQ6WKZ7 506 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Trim47Q8C0E3 641 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Grin3bQ91ZU9 1003 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Mindy4b-psA0A1W2P7H6 457 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Frmd7A2AD83 703 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 XpaQ64267 272 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Adck2Q6NSR3 617 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Tdpoz3Q717B4 365 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ano5Q75UR0 904 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Elmo2Q8BHL5 732 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Scyl3Q9DBQ7 735 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rnf103Q9R1W3 683 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 StrnO55106 780 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 VcpQ01853 806 aaKnown RBP22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Mars2Q499X9 586 aaKnown RBP22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Dnajc5gQ8C632 165 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 TwnkQ8CIW5 685 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Prg3Q9JL95 222 aa22.67■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pth1rP41593 591 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 PtpreP49446 699 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Chrna5Q2MKA5 467 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ndufaf7Q9CWG8 436 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rpn2Q9DBG6 631 aaKnown RBP22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Oog1E9Q5G7 496 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gm8897L7N294 181 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Abce1P61222 599 aaKnown RBP22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ankrd42Q3V096 527 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Rnf10Q3UIW5 804 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Dpf2Q61103 391 aaKnown RBP22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Josd2Q9CR30 188 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Thg1lQ9CY52 298 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Tbx18Q9EPZ6 613 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Hcn2O88703 863 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Snx17Q8BVL3 470 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Osbpl6Q8BXR9 959 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Pcdha9Q91Y11 979 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Gyg1Q9R062 333 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Ankfn1A0A140LIW7 1083 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 C130060K24RikG3UWA8 416 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Cyp2d11P24457 504 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Sarm1Q6PDS3 724 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Cspg5Q71M36 566 aa22.66■■□□□ 1.22
Smarcc1-201ENSMUST00000088716 Baiap2l2Q80Y61 522 aa22.66■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms