RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	SSH1	P38353	490 aa	Known RBP	5	□□□□□ -1.61
RBD2	YPL246C	LSM12	P38828	187 aa	Known RBP	5	□□□□□ -1.61
RBD2	YPL246C	SWM2	P40342	146 aa		5	□□□□□ -1.61
RBD2	YPL246C	YIL024C	P40543	189 aa		5	□□□□□ -1.61
RBD2	YPL246C	YPS6	P40583	537 aa		5	□□□□□ -1.61
RBD2	YPL246C	RHO5	P53879	331 aa	Known RBP	5	□□□□□ -1.61
RBD2	YPL246C	RVB1	Q03940	463 aa	Known RBP	5	□□□□□ -1.61
RBD2	YPL246C	RRT7	Q07829	113 aa		5	□□□□□ -1.61
RBD2	YPL246C	PET20	Q99373	253 aa		5	□□□□□ -1.61
RBD2	YPL246C	ARF1	P11076	181 aa	Known RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	CTA1	P15202	515 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	MEK1	P24719	497 aa	Predicted RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	CWP1	P28319	239 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	FAA1	P30624	700 aa	Known RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	SNC2	P33328	115 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	SRP102	P36057	244 aa	Predicted RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	ASP1	P38986	381 aa	Predicted RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	LTP1	P40347	161 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	SPG5	P42933	373 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	ERJ5	P43613	295 aa	Predicted RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	MCM22	P47167	239 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	YMR210W	Q03649	449 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	BNA5	Q05979	453 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	FRE7	Q12333	620 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.99	□□□□□ -1.61
RBD2	YPL246C	YIL046W-A	Q3E7Z4	54 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	TAD3	Q9URQ3	322 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	HFA1	P32874	2273 aa		4.99	□□□□□ -1.61
RBD2	YPL246C	SEC16	P48415	2195 aa	Known RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	MRS4	P23500	304 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	TRR1	P29509	319 aa	Known RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	VMA5	P31412	392 aa	Known RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	APD1	P38281	316 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	YPC1	P38298	316 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	COS8	P38723	381 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	DLS1	P40366	167 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	YIR035C	P40579	254 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	TRM9	P49957	279 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	PHB2	P50085	310 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	MTM1	P53320	366 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	NRK1	P53915	240 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	SAM50	P53969	484 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	YLR460C	P54007	376 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	SMX3	P54999	86 aa	Predicted RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	APM1	Q00776	475 aa	Predicted RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	CAC2	Q04199	468 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	VBA4	Q04602	768 aa	Known RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	DCS1	Q06151	350 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	NOC4	Q06512	552 aa	Predicted RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	YPR147C	Q06522	304 aa	Known RBP	4.98	□□□□□ -1.61
RBD2	YPL246C	MCT1	Q12283	360 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	YRM1	Q12340	786 aa		4.98	□□□□□ -1.61
RBD2	YPL246C	FMP27	Q06179	2628 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	TDH1	P00360	332 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	KRR1	P25586	316 aa	Predicted RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	SRB6	P32570	121 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	RPS0A	P32905	252 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	SEF1	P34228	1148 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	MRPL15	P36523	253 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	FIG1	P38224	298 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	UMP1	P38293	148 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	YJL193W	P39542	402 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	GPP1	P41277	250 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	GZF3	P42944	551 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	AGX1	P43567	385 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	PNC1	P53184	216 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	YGR126W	P53274	230 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	FMP41	P53889	259 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	AAH1	P53909	347 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	YML018C	Q03730	393 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	YDR102C	Q03864	110 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	HNT1	Q04344	158 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	BER1	Q06688	274 aa	Known RBP	4.97	□□□□□ -1.61
RBD2	YPL246C	IRC19	Q07843	230 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	MIM1	Q08176	113 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	MCH4	Q08268	501 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	RRI1	Q12468	440 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	PRM4	Q12498	284 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	PCC1	Q3E833	88 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	ISN1	Q99312	450 aa		4.97	□□□□□ -1.61
RBD2	YPL246C	UBI4	P0CG63	381 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	RPL40A	P0CH08	128 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	RPL40B	P0CH09	128 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	FRS1	P15624	595 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	GLK1	P17709	500 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	COS9	P36034	407 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	FRM2	P37261	193 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	PIG2	P40187	538 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	ATF1	P40353	525 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	QRI1	P43123	477 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	YGR026W	P53217	278 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	HHO1	P53551	258 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	ALG9	P53868	555 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	RNH201	P53942	307 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	ACT1	P60010	375 aa	Known RBP	4.96	□□□□□ -1.62
RBD2	YPL246C	SNO1	Q03144	224 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	YDR248C	Q03786	193 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	POM34	Q12445	299 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	YPR145C-A	Q2V2P0	78 aa		4.96	□□□□□ -1.62
RBD2	YPL246C	YLL053C	P0CD98	152 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms