RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C PEX4P29340 183 aa6.73□□□□□ -1.33
LSP1YPL004C NAT2P37293 288 aa6.73□□□□□ -1.33
LSP1YPL004C SLM1P40485 686 aa6.73□□□□□ -1.33
LSP1YPL004C YIL060WP40519 144 aa6.73□□□□□ -1.33
LSP1YPL004C BNA2P47125 453 aa6.73□□□□□ -1.33
LSP1YPL004C BXI1P48558 297 aa6.73□□□□□ -1.33
LSP1YPL004C VHT1P53241 593 aa6.73□□□□□ -1.33
LSP1YPL004C YPL067CQ02754 198 aa6.73□□□□□ -1.33
LSP1YPL004C PEX27Q08580 376 aa6.73□□□□□ -1.33
LSP1YPL004C MPD1Q12404 318 aaKnown RBP6.73□□□□□ -1.33
LSP1YPL004C GCD1P09032 578 aaPredicted RBP6.72□□□□□ -1.33
LSP1YPL004C DBP2P24783 546 aaKnown RBP6.72□□□□□ -1.33
LSP1YPL004C RFA3P26755 122 aaKnown RBP6.72□□□□□ -1.33
LSP1YPL004C PRE4P30657 266 aa6.72□□□□□ -1.33
LSP1YPL004C MTC7P32633 139 aa6.72□□□□□ -1.33
LSP1YPL004C UFD1P53044 361 aa6.72□□□□□ -1.33
LSP1YPL004C FMP48P53233 369 aa6.72□□□□□ -1.33
LSP1YPL004C YNR064CP53750 290 aa6.72□□□□□ -1.33
LSP1YPL004C KEI1Q06346 221 aa6.72□□□□□ -1.33
LSP1YPL004C NGL1Q08213 363 aaKnown RBP6.72□□□□□ -1.33
LSP1YPL004C YOR186WQ08560 144 aa6.72□□□□□ -1.33
LSP1YPL004C EAF3Q12432 401 aa6.72□□□□□ -1.33
LSP1YPL004C RPS31P05759 152 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C YCR101CP25607 182 aa6.71□□□□□ -1.34
LSP1YPL004C IMP1P28627 190 aa6.71□□□□□ -1.34
LSP1YPL004C ZUO1P32527 433 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C VAM7P32912 316 aa6.71□□□□□ -1.34
LSP1YPL004C YKL063CP35725 167 aa6.71□□□□□ -1.34
LSP1YPL004C GPI18P38211 433 aa6.71□□□□□ -1.34
LSP1YPL004C CCS1P40202 249 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C GNA1P43577 159 aaPredicted RBP6.71□□□□□ -1.34
LSP1YPL004C MRX5P47007 382 aa6.71□□□□□ -1.34
LSP1YPL004C GWT1P47026 490 aa6.71□□□□□ -1.34
LSP1YPL004C XPT1P47165 209 aa6.71□□□□□ -1.34
LSP1YPL004C SKP1P52286 194 aa6.71□□□□□ -1.34
LSP1YPL004C MRH4P53166 561 aa6.71□□□□□ -1.34
LSP1YPL004C YGR054WP53235 642 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C ERV29P53337 310 aa6.71□□□□□ -1.34
LSP1YPL004C HNT1Q04344 158 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C YDR114CQ04597 100 aa6.71□□□□□ -1.34
LSP1YPL004C YOR283WQ12040 230 aaKnown RBP6.71□□□□□ -1.34
LSP1YPL004C INP53Q12271 1107 aa6.71□□□□□ -1.34
LSP1YPL004C YMR105W-AQ8TGS8 64 aa6.71□□□□□ -1.34
LSP1YPL004C ODC2Q99297 307 aa6.71□□□□□ -1.34
LSP1YPL004C VMA5P31412 392 aaKnown RBP6.7□□□□□ -1.34
LSP1YPL004C PRS2P38620 318 aaKnown RBP6.7□□□□□ -1.34
LSP1YPL004C YHK8P38776 514 aa6.7□□□□□ -1.34
LSP1YPL004C HTD2P38790 280 aaKnown RBP6.7□□□□□ -1.34
LSP1YPL004C SER2P42941 309 aa6.7□□□□□ -1.34
LSP1YPL004C SUT1P53032 299 aaKnown RBP6.7□□□□□ -1.34
LSP1YPL004C UPS1Q05776 175 aa6.7□□□□□ -1.34
LSP1YPL004C CSI2Q08054 341 aa6.7□□□□□ -1.34
LSP1YPL004C SOG2Q08817 791 aa6.7□□□□□ -1.34
LSP1YPL004C WHI5Q12416 295 aa6.7□□□□□ -1.34
LSP1YPL004C TY1A-DR4O74302 440 aa6.69□□□□□ -1.34
LSP1YPL004C REP2P03872 296 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-HP0C2I4 478 aaKnown RBP6.69□□□□□ -1.34
LSP1YPL004C TY1A-AP0CX57 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-PR1P0CX58 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-ORP0CX59 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-PR2P0CX60 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-DR5P0CX65 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-ER2P0CX66 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-GR3P0CX67 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-LR1P0CX68 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-MR2P0CX69 440 aa6.69□□□□□ -1.34
LSP1YPL004C URA6P15700 204 aa6.69□□□□□ -1.34
LSP1YPL004C IFM1P25038 676 aa6.69□□□□□ -1.34
LSP1YPL004C FCY21P40039 528 aa6.69□□□□□ -1.34
LSP1YPL004C YHC3P47040 408 aa6.69□□□□□ -1.34
LSP1YPL004C IRC18P47056 224 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-JR2P47099 440 aa6.69□□□□□ -1.34
LSP1YPL004C RAI1P53063 387 aaKnown RBP6.69□□□□□ -1.34
LSP1YPL004C TY1A-DR1Q03856 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-ML1Q04706 440 aaKnown RBP6.69□□□□□ -1.34
LSP1YPL004C LIP2Q06005 328 aa6.69□□□□□ -1.34
LSP1YPL004C RGC1Q06108 1083 aaKnown RBP6.69□□□□□ -1.34
LSP1YPL004C TY1A-BRQ12217 440 aa6.69□□□□□ -1.34
LSP1YPL004C YOR029WQ12243 111 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-NL2Q12470 440 aa6.69□□□□□ -1.34
LSP1YPL004C TY1A-GR2Q12485 440 aa6.69□□□□□ -1.34
LSP1YPL004C YER145C-AA0A023PYF4 145 aa6.68□□□□□ -1.34
LSP1YPL004C RPN13O13563 156 aa6.68□□□□□ -1.34
LSP1YPL004C RPL15AP05748 204 aaKnown RBP6.68□□□□□ -1.34
LSP1YPL004C RFA1P22336 621 aaKnown RBP6.68□□□□□ -1.34
LSP1YPL004C MSS1P32559 526 aaPredicted RBP6.68□□□□□ -1.34
LSP1YPL004C IES6P32617 166 aa6.68□□□□□ -1.34
LSP1YPL004C ISC10P32645 267 aa6.68□□□□□ -1.34
LSP1YPL004C YBL010CP32788 280 aa6.68□□□□□ -1.34
LSP1YPL004C VMA11P32842 164 aa6.68□□□□□ -1.34
LSP1YPL004C SEC66P33754 206 aa6.68□□□□□ -1.34
LSP1YPL004C GZF3P42944 551 aaKnown RBP6.68□□□□□ -1.34
LSP1YPL004C RPL15BP54780 204 aaPredicted RBP6.68□□□□□ -1.34
LSP1YPL004C PRM15Q03262 622 aa6.68□□□□□ -1.34
LSP1YPL004C CAC2Q04199 468 aa6.68□□□□□ -1.34
LSP1YPL004C UTP15Q04305 513 aaKnown RBP6.68□□□□□ -1.34
LSP1YPL004C AAC1P04710 309 aa6.67□□□□□ -1.34
LSP1YPL004C PET122P10355 254 aa6.67□□□□□ -1.34
LSP1YPL004C RPL3P14126 387 aaKnown RBP6.67□□□□□ -1.34
LSP1YPL004C CDC34P14682 295 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms