RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W TPO4Q12256 659 aa2.34□□□□□ -2.03
SRL1YOR247W YPL247CQ12523 523 aa2.34□□□□□ -2.03
SRL1YOR247W YLR462WO13556 202 aa2.33□□□□□ -2.04
SRL1YOR247W RPL27AP0C2H6 136 aaKnown RBP2.33□□□□□ -2.04
SRL1YOR247W RPL27BP0C2H7 136 aaKnown RBP2.33□□□□□ -2.04
SRL1YOR247W MATALPHA2P0CY08 210 aa2.33□□□□□ -2.04
SRL1YOR247W HMLALPHA2P0CY09 210 aa2.33□□□□□ -2.04
SRL1YOR247W CBF1P17106 351 aa2.33□□□□□ -2.04
SRL1YOR247W SLX1P38324 304 aa2.33□□□□□ -2.04
SRL1YOR247W YEL075CP39972 122 aa2.33□□□□□ -2.04
SRL1YOR247W IRC18P47056 224 aa2.33□□□□□ -2.04
SRL1YOR247W HAM1P47119 197 aaKnown RBP2.33□□□□□ -2.04
SRL1YOR247W ADO1P47143 340 aaKnown RBP2.33□□□□□ -2.04
SRL1YOR247W MGA1P53050 456 aa2.33□□□□□ -2.04
SRL1YOR247W RMR1P53060 241 aa2.33□□□□□ -2.04
SRL1YOR247W ALG13P53178 202 aa2.33□□□□□ -2.04
SRL1YOR247W FAR8Q05040 523 aa2.33□□□□□ -2.04
SRL1YOR247W EMP46Q12396 444 aa2.33□□□□□ -2.04
SRL1YOR247W SIR4P11978 1358 aa2.33□□□□□ -2.04
SRL1YOR247W DRS2P39524 1355 aa2.33□□□□□ -2.04
SRL1YOR247W COX5AP00424 153 aa2.32□□□□□ -2.04
SRL1YOR247W HTB1P02293 131 aaKnown RBP2.32□□□□□ -2.04
SRL1YOR247W HTB2P02294 131 aa2.32□□□□□ -2.04
SRL1YOR247W TOM40P23644 387 aaKnown RBP2.32□□□□□ -2.04
SRL1YOR247W MGM101P32787 269 aaKnown RBP2.32□□□□□ -2.04
SRL1YOR247W PRX1P34227 261 aaKnown RBP2.32□□□□□ -2.04
SRL1YOR247W IKI1P38874 309 aa2.32□□□□□ -2.04
SRL1YOR247W YGL034CP53186 121 aa2.32□□□□□ -2.04
SRL1YOR247W YPR172WQ06608 200 aa2.32□□□□□ -2.04
SRL1YOR247W ABP140Q08641 628 aaKnown RBP2.32□□□□□ -2.04
SRL1YOR247W YPL257WQ08974 193 aa2.32□□□□□ -2.04
SRL1YOR247W HTL1Q9URQ5 78 aa2.32□□□□□ -2.04
SRL1YOR247W YDR157WA0A023PZE8 133 aa2.31□□□□□ -2.04
SRL1YOR247W HIS3P06633 220 aa2.31□□□□□ -2.04
SRL1YOR247W YPK2P18961 677 aa2.31□□□□□ -2.04
SRL1YOR247W SEC22P22214 214 aa2.31□□□□□ -2.04
SRL1YOR247W YGP1P38616 354 aaKnown RBP2.31□□□□□ -2.04
SRL1YOR247W COS8P38723 381 aa2.31□□□□□ -2.04
SRL1YOR247W YRB2P40517 327 aa2.31□□□□□ -2.04
SRL1YOR247W PFS2P42841 465 aaKnown RBP2.31□□□□□ -2.04
SRL1YOR247W BXI1P48558 297 aa2.31□□□□□ -2.04
SRL1YOR247W MDM34P53083 459 aa2.31□□□□□ -2.04
SRL1YOR247W GET1P53192 235 aa2.31□□□□□ -2.04
SRL1YOR247W ABF2Q02486 183 aa2.31□□□□□ -2.04
SRL1YOR247W FCF1Q05498 189 aaPredicted RBP2.31□□□□□ -2.04
SRL1YOR247W YLR179CQ06252 201 aaKnown RBP2.31□□□□□ -2.04
SRL1YOR247W GEP5Q12393 293 aa2.31□□□□□ -2.04
SRL1YOR247W NOT5Q12514 560 aaPredicted RBP2.31□□□□□ -2.04
SRL1YOR247W LSO2Q3E772 92 aaKnown RBP2.31□□□□□ -2.04
SRL1YOR247W SWI1P09547 1314 aa2.31□□□□□ -2.04
SRL1YOR247W CCH1P50077 2039 aa2.3□□□□□ -2.04
SRL1YOR247W ADH3P07246 375 aaKnown RBP2.3□□□□□ -2.04
SRL1YOR247W MER1P16523 270 aa2.3□□□□□ -2.04
SRL1YOR247W TAF14P35189 244 aa2.3□□□□□ -2.04
SRL1YOR247W RCN1P36054 211 aa2.3□□□□□ -2.04
SRL1YOR247W CAT5P41735 233 aa2.3□□□□□ -2.04
SRL1YOR247W YMD8Q03697 442 aa2.3□□□□□ -2.04
SRL1YOR247W YML096WQ04489 525 aa2.3□□□□□ -2.04
SRL1YOR247W INM2Q05533 292 aa2.3□□□□□ -2.04
SRL1YOR247W YPR195CQ06594 109 aa2.3□□□□□ -2.04
SRL1YOR247W YOR020W-AQ3E824 90 aa2.3□□□□□ -2.04
SRL1YOR247W CDC28P00546 298 aaKnown RBP2.29□□□□□ -2.04
SRL1YOR247W RAD10P06838 210 aa2.29□□□□□ -2.04
SRL1YOR247W RPS23AP0CX29 145 aaKnown RBP2.29□□□□□ -2.04
SRL1YOR247W RPS23BP0CX30 145 aa2.29□□□□□ -2.04
SRL1YOR247W GCN3P14741 305 aa2.29□□□□□ -2.04
SRL1YOR247W RFA3P26755 122 aaKnown RBP2.29□□□□□ -2.04
SRL1YOR247W ERG24P32462 438 aaKnown RBP2.29□□□□□ -2.04
SRL1YOR247W YPT52P36018 234 aaKnown RBP2.29□□□□□ -2.04
SRL1YOR247W TRM5P38793 499 aa2.29□□□□□ -2.04
SRL1YOR247W PEX17P40155 199 aa2.29□□□□□ -2.04
SRL1YOR247W OST2P46964 130 aa2.29□□□□□ -2.04
SRL1YOR247W YJR141WP47172 347 aaPredicted RBP2.29□□□□□ -2.04
SRL1YOR247W YGL159WP53110 370 aa2.29□□□□□ -2.04
SRL1YOR247W TOS8P53147 276 aa2.29□□□□□ -2.04
SRL1YOR247W GTR2P53290 341 aa2.29□□□□□ -2.04
SRL1YOR247W PDR17P53844 350 aa2.29□□□□□ -2.04
SRL1YOR247W YLR030WQ07967 263 aa2.29□□□□□ -2.04
SRL1YOR247W MSA1Q08471 629 aa2.29□□□□□ -2.04
SRL1YOR247W BBP1Q12365 385 aa2.29□□□□□ -2.04
SRL1YOR247W CHD1P32657 1468 aa2.28□□□□□ -2.04
SRL1YOR247W DBF2P22204 572 aa2.28□□□□□ -2.04
SRL1YOR247W RSA4P25382 515 aaKnown RBP2.28□□□□□ -2.04
SRL1YOR247W MSA2P36157 363 aa2.28□□□□□ -2.04
SRL1YOR247W FIS1P40515 155 aa2.28□□□□□ -2.04
SRL1YOR247W FAR7P43592 221 aa2.28□□□□□ -2.04
SRL1YOR247W PRM8P53174 237 aa2.28□□□□□ -2.04
SRL1YOR247W ERV29P53337 310 aa2.28□□□□□ -2.04
SRL1YOR247W DID2P69771 204 aa2.28□□□□□ -2.04
SRL1YOR247W YDR248CQ03786 193 aa2.28□□□□□ -2.04
SRL1YOR247W YDL012CQ12489 107 aa2.28□□□□□ -2.04
SRL1YOR247W RAD9P14737 1309 aa2.27□□□□□ -2.05
SRL1YOR247W SGA1P08019 549 aa2.27□□□□□ -2.05
SRL1YOR247W DSF1P0CX08 502 aa2.27□□□□□ -2.05
SRL1YOR247W YNR073CP0CX09 502 aa2.27□□□□□ -2.05
SRL1YOR247W SRY1P36007 326 aa2.27□□□□□ -2.05
SRL1YOR247W YCR087C-AP37263 153 aa2.27□□□□□ -2.05
SRL1YOR247W BMT5P40493 336 aa2.27□□□□□ -2.05
SRL1YOR247W GON7P46984 123 aa2.27□□□□□ -2.05
SRL1YOR247W HOP2P53187 214 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms