RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeast

Gene CKB2, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKB2	YOR039W	BLM10	P43583	2143 aa		4.27	□□□□□ -1.73
CKB2	YOR039W	UTP20	P35194	2493 aa	Known RBP	4.27	□□□□□ -1.73
CKB2	YOR039W	PDE2	P06776	526 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	SPS4	P09937	338 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	MSI1	P13712	422 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	CDC23	P16522	626 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	APA2	P22108	325 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	RPS5	P26783	225 aa	Known RBP	4.26	□□□□□ -1.73
CKB2	YOR039W	FUN19	P28003	413 aa	Predicted RBP	4.26	□□□□□ -1.73
CKB2	YOR039W	RTC2	P38279	296 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YHR035W	P38769	630 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	MDM31	P38880	579 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YIL029C	P40538	142 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YIR020C	P40575	100 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YJL016W	P47072	561 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	CCC1	P47818	322 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	PKP2	P53170	491 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	PGA1	P53896	198 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YPL077C	Q02831	240 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	FIN1	Q03898	291 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	YDR415C	Q04033	374 aa	Predicted RBP	4.26	□□□□□ -1.73
CKB2	YOR039W	SMP3	Q04174	516 aa		4.26	□□□□□ -1.73
CKB2	YOR039W	RRS1	Q08746	203 aa	Known RBP	4.26	□□□□□ -1.73
CKB2	YOR039W	PST2	Q12335	198 aa	Known RBP	4.26	□□□□□ -1.73
CKB2	YOR039W	STE18	P18852	110 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	IDP1	P21954	428 aa	Known RBP	4.25	□□□□□ -1.73
CKB2	YOR039W	BOS1	P25385	244 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	RPB9	P27999	122 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	PRP21	P32524	280 aa	Predicted RBP	4.25	□□□□□ -1.73
CKB2	YOR039W	GLC7	P32598	312 aa	Known RBP	4.25	□□□□□ -1.73
CKB2	YOR039W	ECT1	P33412	323 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	AST1	P35183	429 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	ANR2	P36090	516 aa	Predicted RBP	4.25	□□□□□ -1.73
CKB2	YOR039W	PHD1	P36093	366 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	VOA1	P53262	265 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	YNR048W	P53740	393 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	NRK1	P53915	240 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	YDC1	Q02896	317 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	RRP9	Q06506	573 aa	Known RBP	4.25	□□□□□ -1.73
CKB2	YOR039W	RTR2	Q12378	196 aa		4.25	□□□□□ -1.73
CKB2	YOR039W	TDH2	P00358	332 aa	Known RBP	4.24	□□□□□ -1.73
CKB2	YOR039W	DBF2	P22204	572 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	FRM2	P37261	193 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	YBR063C	P38083	404 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	ECM8	P38246	354 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	SLM4	P38247	162 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	IPT1	P38954	527 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	YER188W	P40103	239 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CKB2	YOR039W	NCA3	P46955	337 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	YHC3	P47040	408 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	SMM1	P53720	384 aa	Known RBP	4.24	□□□□□ -1.73
CKB2	YOR039W	SAM50	P53969	484 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	CIK1	Q01649	594 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	YMR279C	Q03263	540 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	GAL83	Q04739	417 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	YPR098C	Q06089	161 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	GRC3	Q07845	632 aa		4.24	□□□□□ -1.73
CKB2	YOR039W	CCW14	O13547	238 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	COX5B	P00425	151 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	DEG1	P31115	442 aa	Known RBP	4.23	□□□□□ -1.73
CKB2	YOR039W	MCH2	P36032	473 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	FLX1	P40464	311 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	YRB2	P40517	327 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	TIR3	P40552	269 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	YNR064C	P53750	290 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	PRM15	Q03262	622 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	DPB4	Q04603	196 aa	Known RBP	4.23	□□□□□ -1.73
CKB2	YOR039W	IRC25	Q07951	179 aa		4.23	□□□□□ -1.73
CKB2	YOR039W	SEC16	P48415	2195 aa	Known RBP	4.22	□□□□□ -1.73
CKB2	YOR039W	RPL30	P14120	105 aa	Known RBP	4.22	□□□□□ -1.73
CKB2	YOR039W	MRPS28	P21771	286 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	LAG1	P38703	411 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	DLS1	P40366	167 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	GLR1	P41921	483 aa	Known RBP	4.22	□□□□□ -1.73
CKB2	YOR039W	CIN2	P46670	268 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	GEP7	P53171	287 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	PXR1	P53335	271 aa	Predicted RBP	4.22	□□□□□ -1.73
CKB2	YOR039W	YPL067C	Q02754	198 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	YMR087W	Q04299	284 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	YMR317W	Q04893	1140 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	TSR2	Q06672	205 aa	Known RBP	4.22	□□□□□ -1.73
CKB2	YOR039W	SSK1	Q07084	712 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	GAT3	Q07928	141 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	RFU1	Q08003	200 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	CSI2	Q08054	341 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	YBR126W-A	Q8TGU7	68 aa		4.22	□□□□□ -1.73
CKB2	YOR039W	MES1	P00958	751 aa	Known RBP	4.21	□□□□□ -1.74
CKB2	YOR039W	PUT3	P25502	979 aa	Predicted RBP	4.21	□□□□□ -1.74
CKB2	YOR039W	TMA19	P35691	167 aa	Known RBP	4.21	□□□□□ -1.74
CKB2	YOR039W	YKR015C	P36111	568 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	SAY1	P53324	424 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	AAH1	P53909	347 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	YLR152C	P54072	576 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	HHT1	P61830	136 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	YDR248C	Q03786	193 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	MSS11	Q03825	758 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	YLR345W	Q06137	509 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	FRE8	Q12209	686 aa		4.21	□□□□□ -1.74
CKB2	YOR039W	KIN28	P06242	306 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms