RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C BEM2P39960 2167 aaKnown RBP1.71□□□□□ -2.14
SHE4YOR035C HIS1P00498 297 aaKnown RBP1.71□□□□□ -2.14
SHE4YOR035C COS2P0CX12 379 aa1.71□□□□□ -2.14
SHE4YOR035C COS3P0CX13 379 aa1.71□□□□□ -2.14
SHE4YOR035C CLB6P32943 380 aa1.71□□□□□ -2.14
SHE4YOR035C MAL32P38158 584 aa1.71□□□□□ -2.14
SHE4YOR035C MNN5P46982 586 aa1.71□□□□□ -2.14
SHE4YOR035C GON7P46984 123 aa1.71□□□□□ -2.14
SHE4YOR035C KAP114P53067 1004 aa1.71□□□□□ -2.14
SHE4YOR035C MAL12P53341 584 aa1.71□□□□□ -2.14
SHE4YOR035C MYO5Q04439 1219 aaKnown RBP1.71□□□□□ -2.14
SHE4YOR035C YOR268CQ08734 132 aa1.71□□□□□ -2.14
SHE4YOR035C RPL26AP05743 127 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C RPS24AP0CX31 135 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C RPS24BP0CX32 135 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C DPM1P14020 267 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C RNP1P32385 249 aa1.7□□□□□ -2.14
SHE4YOR035C MRPL37P36532 105 aa1.7□□□□□ -2.14
SHE4YOR035C TEM1P38987 245 aa1.7□□□□□ -2.14
SHE4YOR035C DDI1P40087 428 aa1.7□□□□□ -2.14
SHE4YOR035C AGX1P43567 385 aa1.7□□□□□ -2.14
SHE4YOR035C YJR012CP47087 207 aa1.7□□□□□ -2.14
SHE4YOR035C NBP35P52920 328 aa1.7□□□□□ -2.14
SHE4YOR035C RPL26BP53221 127 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C OST6Q03723 332 aa1.7□□□□□ -2.14
SHE4YOR035C SME1Q12330 94 aaPredicted RBP1.7□□□□□ -2.14
SHE4YOR035C NOT5Q12514 560 aaPredicted RBP1.7□□□□□ -2.14
SHE4YOR035C YPL247CQ12523 523 aa1.7□□□□□ -2.14
SHE4YOR035C RPL24AP04449 155 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C YJR146WP47174 117 aa1.7□□□□□ -2.14
SHE4YOR035C YMR114CQ04471 368 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C BOP2Q06150 570 aa1.7□□□□□ -2.14
SHE4YOR035C SLD7Q08457 257 aa1.7□□□□□ -2.14
SHE4YOR035C SMT3Q12306 101 aaKnown RBP1.7□□□□□ -2.14
SHE4YOR035C OM45P16547 393 aa1.69□□□□□ -2.14
SHE4YOR035C PRM9P39551 298 aa1.69□□□□□ -2.14
SHE4YOR035C VPS68Q12016 184 aa1.69□□□□□ -2.14
SHE4YOR035C YDR524C-BQ3E6R4 66 aa1.69□□□□□ -2.14
SHE4YOR035C RAD3P06839 778 aa1.69□□□□□ -2.14
SHE4YOR035C YHR045WP38775 560 aa1.69□□□□□ -2.14
SHE4YOR035C RTT105P40063 208 aa1.69□□□□□ -2.14
SHE4YOR035C YJL118WP47022 219 aa1.69□□□□□ -2.14
SHE4YOR035C MAL13P53338 473 aa1.69□□□□□ -2.14
SHE4YOR035C AAH1P53909 347 aa1.69□□□□□ -2.14
SHE4YOR035C SLM2P53955 656 aa1.69□□□□□ -2.14
SHE4YOR035C GEP5Q12393 293 aa1.69□□□□□ -2.14
SHE4YOR035C MRP1P10662 321 aaKnown RBP1.68□□□□□ -2.14
SHE4YOR035C GDH2P33327 1092 aaKnown RBP1.68□□□□□ -2.14
SHE4YOR035C GPI8P49018 411 aa1.68□□□□□ -2.14
SHE4YOR035C MDM34P53083 459 aa1.68□□□□□ -2.14
SHE4YOR035C EMI1Q04406 187 aa1.68□□□□□ -2.14
SHE4YOR035C COX20Q04935 205 aa1.68□□□□□ -2.14
SHE4YOR035C CWP1P28319 239 aa1.67□□□□□ -2.14
SHE4YOR035C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SHE4YOR035C YGP1P38616 354 aaKnown RBP1.67□□□□□ -2.14
SHE4YOR035C YJL016WP47072 561 aa1.67□□□□□ -2.14
SHE4YOR035C NBP1P52919 319 aaPredicted RBP1.67□□□□□ -2.14
SHE4YOR035C YPL119C-AQ3E751 87 aa1.67□□□□□ -2.14
SHE4YOR035C PPH21P23594 369 aa1.67□□□□□ -2.14
SHE4YOR035C COG3P40094 801 aa1.67□□□□□ -2.14
SHE4YOR035C EBS1Q03466 884 aaKnown RBP1.67□□□□□ -2.14
SHE4YOR035C FKS1P38631 1876 aaKnown RBP1.67□□□□□ -2.14
SHE4YOR035C DRE2P36152 348 aa1.66□□□□□ -2.14
SHE4YOR035C ALG11P53954 548 aaKnown RBP1.66□□□□□ -2.14
SHE4YOR035C ECM29P38737 1868 aa1.66□□□□□ -2.14
SHE4YOR035C POX1P13711 748 aa1.66□□□□□ -2.14
SHE4YOR035C MPP6P53725 186 aaPredicted RBP1.66□□□□□ -2.14
SHE4YOR035C YOR283WQ12040 230 aaKnown RBP1.66□□□□□ -2.14
SHE4YOR035C YBL008W-AQ3E821 79 aa1.66□□□□□ -2.14
SHE4YOR035C COX2P00410 251 aa1.65□□□□□ -2.14
SHE4YOR035C RIB7P33312 244 aa1.65□□□□□ -2.14
SHE4YOR035C ECM13P38195 257 aa1.65□□□□□ -2.14
SHE4YOR035C RPL10P41805 221 aaKnown RBP1.65□□□□□ -2.14
SHE4YOR035C CGI121Q03705 181 aaKnown RBP1.65□□□□□ -2.14
SHE4YOR035C ADH6Q04894 360 aaKnown RBP1.65□□□□□ -2.14
SHE4YOR035C YPR011CQ12251 326 aa1.65□□□□□ -2.14
SHE4YOR035C SCO1P23833 295 aa1.65□□□□□ -2.15
SHE4YOR035C QRI5P32344 111 aa1.65□□□□□ -2.15
SHE4YOR035C PRS2P38620 318 aaKnown RBP1.65□□□□□ -2.15
SHE4YOR035C YHL026CP38740 315 aa1.65□□□□□ -2.15
SHE4YOR035C PET100P38958 111 aa1.65□□□□□ -2.15
SHE4YOR035C CAB4P53332 305 aa1.65□□□□□ -2.15
SHE4YOR035C MDN1Q12019 4910 aaKnown RBP1.65□□□□□ -2.15
SHE4YOR035C VPS3P23643 1011 aa1.64□□□□□ -2.15
SHE4YOR035C MSB2P32334 1306 aa1.64□□□□□ -2.15
SHE4YOR035C RTR1P40084 226 aaPredicted RBP1.64□□□□□ -2.15
SHE4YOR035C TIF34P40217 347 aaKnown RBP1.64□□□□□ -2.15
SHE4YOR035C DSN1P40568 576 aa1.64□□□□□ -2.15
SHE4YOR035C MRPL49P40858 161 aaPredicted RBP1.64□□□□□ -2.15
SHE4YOR035C YDR209CQ03480 137 aa1.64□□□□□ -2.15
SHE4YOR035C DAL82P21705 255 aa1.64□□□□□ -2.15
SHE4YOR035C DAN1P47178 298 aa1.64□□□□□ -2.15
SHE4YOR035C COS6P53344 381 aa1.64□□□□□ -2.15
SHE4YOR035C PEX12Q04370 399 aa1.64□□□□□ -2.15
SHE4YOR035C YLR179CQ06252 201 aaKnown RBP1.64□□□□□ -2.15
SHE4YOR035C YPR147CQ06522 304 aaKnown RBP1.64□□□□□ -2.15
SHE4YOR035C SAS5Q99314 248 aa1.64□□□□□ -2.15
SHE4YOR035C TRA1P38811 3744 aa1.64□□□□□ -2.15
SHE4YOR035C SSH1P38353 490 aaKnown RBP1.63□□□□□ -2.15
SHE4YOR035C ATG17Q06410 417 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms