RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C MPM1P40364 252 aa2.26□□□□□ -2.05
DNL4YOR005C ERG10P41338 398 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C TES1P41903 349 aaKnown RBP2.26□□□□□ -2.05
DNL4YOR005C ATG18P43601 500 aa2.26□□□□□ -2.05
DNL4YOR005C YJR030CP47101 745 aa2.26□□□□□ -2.05
DNL4YOR005C HHO1P53551 258 aa2.26□□□□□ -2.05
DNL4YOR005C GOR1P53839 350 aa2.26□□□□□ -2.05
DNL4YOR005C PIR3Q03180 325 aa2.26□□□□□ -2.05
DNL4YOR005C GOT1Q03554 138 aa2.26□□□□□ -2.05
DNL4YOR005C YMR010WQ03687 405 aa2.26□□□□□ -2.05
DNL4YOR005C VBA1Q04301 562 aa2.26□□□□□ -2.05
DNL4YOR005C YLR012CQ07927 99 aa2.26□□□□□ -2.05
DNL4YOR005C SFM1Q12314 213 aa2.26□□□□□ -2.05
DNL4YOR005C ICT1Q12385 394 aa2.26□□□□□ -2.05
DNL4YOR005C YPK2P18961 677 aa2.25□□□□□ -2.05
DNL4YOR005C PHO80P20052 293 aa2.25□□□□□ -2.05
DNL4YOR005C OAC1P32332 324 aa2.25□□□□□ -2.05
DNL4YOR005C PPZ2P33329 710 aa2.25□□□□□ -2.05
DNL4YOR005C YCR087C-AP37263 153 aa2.25□□□□□ -2.05
DNL4YOR005C RIB5P38145 238 aa2.25□□□□□ -2.05
DNL4YOR005C MAL32P38158 584 aa2.25□□□□□ -2.05
DNL4YOR005C MIX23P38162 196 aa2.25□□□□□ -2.05
DNL4YOR005C RRG9P40156 214 aa2.25□□□□□ -2.05
DNL4YOR005C ALG8P40351 577 aa2.25□□□□□ -2.05
DNL4YOR005C MPC1P53157 130 aaKnown RBP2.25□□□□□ -2.05
DNL4YOR005C MAL12P53341 584 aa2.25□□□□□ -2.05
DNL4YOR005C OST6Q03723 332 aa2.25□□□□□ -2.05
DNL4YOR005C RIF2Q06208 395 aa2.25□□□□□ -2.05
DNL4YOR005C CDD1Q06549 142 aa2.25□□□□□ -2.05
DNL4YOR005C ZEO1Q08245 113 aa2.25□□□□□ -2.05
DNL4YOR005C RRG7Q08774 242 aaPredicted RBP2.25□□□□□ -2.05
DNL4YOR005C COX5AP00424 153 aa2.25□□□□□ -2.05
DNL4YOR005C MRP1P10662 321 aaKnown RBP2.25□□□□□ -2.05
DNL4YOR005C RNA14P25298 677 aaKnown RBP2.25□□□□□ -2.05
DNL4YOR005C NAM9P27929 486 aa2.25□□□□□ -2.05
DNL4YOR005C CPR5P35176 225 aa2.25□□□□□ -2.05
DNL4YOR005C NSG1P38837 291 aa2.25□□□□□ -2.05
DNL4YOR005C EDC3P39998 551 aaKnown RBP2.25□□□□□ -2.05
DNL4YOR005C RPS12P48589 143 aaKnown RBP2.25□□□□□ -2.05
DNL4YOR005C EMI1Q04406 187 aa2.25□□□□□ -2.05
DNL4YOR005C NNT1Q05874 261 aa2.25□□□□□ -2.05
DNL4YOR005C YOR387CQ08910 206 aa2.25□□□□□ -2.05
DNL4YOR005C YLR126CQ12288 251 aa2.25□□□□□ -2.05
DNL4YOR005C PSF1Q12488 208 aa2.25□□□□□ -2.05
DNL4YOR005C CSR2Q12734 1121 aa2.25□□□□□ -2.05
DNL4YOR005C CMC2Q3E7A4 109 aa2.25□□□□□ -2.05
DNL4YOR005C QCR7P00128 127 aa2.24□□□□□ -2.05
DNL4YOR005C MRS3P10566 314 aa2.24□□□□□ -2.05
DNL4YOR005C PEX34P25584 144 aa2.24□□□□□ -2.05
DNL4YOR005C YCR099CP25657 155 aa2.24□□□□□ -2.05
DNL4YOR005C HOM6P31116 359 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C LDS1P31379 325 aa2.24□□□□□ -2.05
DNL4YOR005C YBL010CP32788 280 aa2.24□□□□□ -2.05
DNL4YOR005C SDH3P33421 198 aa2.24□□□□□ -2.05
DNL4YOR005C YPT52P36018 234 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C VPS51P36116 164 aa2.24□□□□□ -2.05
DNL4YOR005C PRS2P38620 318 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C EFM1P38732 585 aa2.24□□□□□ -2.05
DNL4YOR005C YIL169CP40442 995 aa2.24□□□□□ -2.05
DNL4YOR005C TIR3P40552 269 aa2.24□□□□□ -2.05
DNL4YOR005C GTT1P40582 234 aa2.24□□□□□ -2.05
DNL4YOR005C ERV29P53337 310 aa2.24□□□□□ -2.05
DNL4YOR005C TRM44Q02648 567 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C MRX4Q12467 430 aa2.24□□□□□ -2.05
DNL4YOR005C SNF8Q12483 233 aa2.24□□□□□ -2.05
DNL4YOR005C YCR024C-BQ3E7Z8 88 aa2.24□□□□□ -2.05
DNL4YOR005C YCL012CQ8J0M4 134 aa2.24□□□□□ -2.05
DNL4YOR005C YEL009C-AA0A023PZF2 135 aa2.24□□□□□ -2.05
DNL4YOR005C REV1P12689 985 aa2.24□□□□□ -2.05
DNL4YOR005C APA2P22108 325 aa2.24□□□□□ -2.05
DNL4YOR005C MAG1P22134 296 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C RSA4P25382 515 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C AHC2P25649 128 aa2.24□□□□□ -2.05
DNL4YOR005C NDC1P32500 655 aa2.24□□□□□ -2.05
DNL4YOR005C SRB6P32570 121 aa2.24□□□□□ -2.05
DNL4YOR005C PDC2P32896 925 aa2.24□□□□□ -2.05
DNL4YOR005C PTR2P32901 601 aa2.24□□□□□ -2.05
DNL4YOR005C AVT5P38176 459 aa2.24□□□□□ -2.05
DNL4YOR005C BMT2P38278 337 aa2.24□□□□□ -2.05
DNL4YOR005C RTC3P38804 111 aaPredicted RBP2.24□□□□□ -2.05
DNL4YOR005C HPA3P39979 161 aa2.24□□□□□ -2.05
DNL4YOR005C PAN6P40459 309 aa2.24□□□□□ -2.05
DNL4YOR005C OST1P41543 476 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C WWM1P43582 211 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C RPE1P46969 238 aa2.24□□□□□ -2.05
DNL4YOR005C COS10P52924 374 aa2.24□□□□□ -2.05
DNL4YOR005C MST27P53176 234 aa2.24□□□□□ -2.05
DNL4YOR005C JAC1P53193 184 aa2.24□□□□□ -2.05
DNL4YOR005C FMP48P53233 369 aa2.24□□□□□ -2.05
DNL4YOR005C YDR415CQ04033 374 aaPredicted RBP2.24□□□□□ -2.05
DNL4YOR005C DDC1Q08949 612 aa2.24□□□□□ -2.05
DNL4YOR005C YOR283WQ12040 230 aaKnown RBP2.24□□□□□ -2.05
DNL4YOR005C SIR2P06700 562 aa2.23□□□□□ -2.05
DNL4YOR005C RPS1BP23248 255 aaKnown RBP2.23□□□□□ -2.05
DNL4YOR005C RNP1P32385 249 aa2.23□□□□□ -2.05
DNL4YOR005C IES6P32617 166 aa2.23□□□□□ -2.05
DNL4YOR005C MCH2P36032 473 aa2.23□□□□□ -2.05
DNL4YOR005C PMU1P36069 295 aa2.23□□□□□ -2.05
DNL4YOR005C DRE2P36152 348 aa2.23□□□□□ -2.05
DNL4YOR005C RMD6P39975 231 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 131.6 ms