RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C PEX3P28795 441 aa2.48□□□□□ -2.01
ATG3YNR007C CAM1P29547 415 aaKnown RBP2.48□□□□□ -2.01
ATG3YNR007C MRPS5P33759 307 aa2.48□□□□□ -2.01
ATG3YNR007C PTC1P35182 281 aa2.48□□□□□ -2.01
ATG3YNR007C YKL071WP36086 256 aa2.48□□□□□ -2.01
ATG3YNR007C YBR220CP38318 560 aa2.48□□□□□ -2.01
ATG3YNR007C GCN20P43535 752 aaKnown RBP2.48□□□□□ -2.01
ATG3YNR007C SBH2P52871 88 aa2.48□□□□□ -2.01
ATG3YNR007C YNL095CP53932 642 aa2.48□□□□□ -2.01
ATG3YNR007C SPR6Q01684 191 aa2.48□□□□□ -2.01
ATG3YNR007C NUP116Q02630 1113 aa2.48□□□□□ -2.01
ATG3YNR007C DIG2Q03373 323 aaKnown RBP2.48□□□□□ -2.01
ATG3YNR007C SCS7Q03529 384 aa2.48□□□□□ -2.01
ATG3YNR007C SPC24Q04477 213 aa2.48□□□□□ -2.01
ATG3YNR007C YRM1Q12340 786 aa2.48□□□□□ -2.01
ATG3YNR007C GEP5Q12393 293 aa2.48□□□□□ -2.01
ATG3YNR007C YOP1Q12402 180 aa2.48□□□□□ -2.01
ATG3YNR007C MRX4Q12467 430 aa2.48□□□□□ -2.01
ATG3YNR007C REP1P03871 373 aa2.47□□□□□ -2.01
ATG3YNR007C DPM1P14020 267 aaKnown RBP2.47□□□□□ -2.01
ATG3YNR007C ERD2P18414 219 aa2.47□□□□□ -2.01
ATG3YNR007C MDH2P22133 377 aa2.47□□□□□ -2.01
ATG3YNR007C SCO1P23833 295 aa2.47□□□□□ -2.01
ATG3YNR007C HSP30P25619 332 aa2.47□□□□□ -2.01
ATG3YNR007C ITR2P30606 609 aa2.47□□□□□ -2.01
ATG3YNR007C SWD3P38123 315 aa2.47□□□□□ -2.01
ATG3YNR007C YBR241CP38142 488 aa2.47□□□□□ -2.01
ATG3YNR007C SBE22P38814 852 aa2.47□□□□□ -2.01
ATG3YNR007C RBG1P39729 369 aa2.47□□□□□ -2.01
ATG3YNR007C BAT2P47176 376 aaKnown RBP2.47□□□□□ -2.01
ATG3YNR007C SIP18P50263 79 aa2.47□□□□□ -2.01
ATG3YNR007C YGL235WP53071 178 aa2.47□□□□□ -2.01
ATG3YNR007C YIP5P53108 310 aa2.47□□□□□ -2.01
ATG3YNR007C MPP6P53725 186 aaPredicted RBP2.47□□□□□ -2.01
ATG3YNR007C IGO1P53897 168 aa2.47□□□□□ -2.01
ATG3YNR007C RNY1Q02933 434 aaKnown RBP2.47□□□□□ -2.01
ATG3YNR007C RCE1Q03530 315 aa2.47□□□□□ -2.01
ATG3YNR007C GMC1Q04399 608 aa2.47□□□□□ -2.01
ATG3YNR007C ARV1Q06541 321 aa2.47□□□□□ -2.01
ATG3YNR007C LDS2Q08218 356 aa2.47□□□□□ -2.01
ATG3YNR007C YPR202WQ08993 238 aa2.47□□□□□ -2.01
ATG3YNR007C YGK3Q12222 375 aaPredicted RBP2.47□□□□□ -2.01
ATG3YNR007C JID1Q12350 301 aa2.47□□□□□ -2.01
ATG3YNR007C EAF3Q12432 401 aa2.47□□□□□ -2.01
ATG3YNR007C HTZ1Q12692 134 aaKnown RBP2.47□□□□□ -2.01
ATG3YNR007C ADF1Q2V2Q1 113 aa2.47□□□□□ -2.01
ATG3YNR007C OPI3P05375 206 aa2.46□□□□□ -2.02
ATG3YNR007C RPS23AP0CX29 145 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C RPS23BP0CX30 145 aa2.46□□□□□ -2.02
ATG3YNR007C RPS8AP0CX39 200 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C RPS8BP0CX40 200 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C PET9P18239 318 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C MDH3P32419 343 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
ATG3YNR007C TOA2P32774 122 aa2.46□□□□□ -2.02
ATG3YNR007C TIM12P32830 109 aa2.46□□□□□ -2.02
ATG3YNR007C RPT5P33297 434 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C RPS20P38701 121 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C ARN2P38724 620 aa2.46□□□□□ -2.02
ATG3YNR007C MTW1P39731 289 aa2.46□□□□□ -2.02
ATG3YNR007C RFC4P40339 323 aaKnown RBP2.46□□□□□ -2.02
ATG3YNR007C MOB2P43563 287 aa2.46□□□□□ -2.02
ATG3YNR007C FAR7P43592 221 aa2.46□□□□□ -2.02
ATG3YNR007C RPA34P47006 233 aaPredicted RBP2.46□□□□□ -2.02
ATG3YNR007C AIM24P47127 394 aa2.46□□□□□ -2.02
ATG3YNR007C PMT5P52867 743 aa2.46□□□□□ -2.02
ATG3YNR007C GET1P53192 235 aa2.46□□□□□ -2.02
ATG3YNR007C RRN9P53437 365 aa2.46□□□□□ -2.02
ATG3YNR007C INP1Q03694 420 aa2.46□□□□□ -2.02
ATG3YNR007C RNH1Q04740 348 aa2.46□□□□□ -2.02
ATG3YNR007C SPC2Q04969 178 aa2.46□□□□□ -2.02
ATG3YNR007C SFH1Q06168 426 aa2.46□□□□□ -2.02
ATG3YNR007C MRPL35Q06678 367 aa2.46□□□□□ -2.02
ATG3YNR007C YDL114WQ07530 308 aa2.46□□□□□ -2.02
ATG3YNR007C VIK1Q12045 647 aa2.46□□□□□ -2.02
ATG3YNR007C FOL3Q12676 427 aaPredicted RBP2.46□□□□□ -2.02
ATG3YNR007C YGL041W-AP0C5N3 154 aa2.45□□□□□ -2.02
ATG3YNR007C SPS100P13130 326 aa2.45□□□□□ -2.02
ATG3YNR007C MSI1P13712 422 aa2.45□□□□□ -2.02
ATG3YNR007C APA2P22108 325 aa2.45□□□□□ -2.02
ATG3YNR007C DPH5P32469 300 aaPredicted RBP2.45□□□□□ -2.02
ATG3YNR007C CLB6P32943 380 aa2.45□□□□□ -2.02
ATG3YNR007C CLG1P35190 452 aa2.45□□□□□ -2.02
ATG3YNR007C RIB1P38066 345 aa2.45□□□□□ -2.02
ATG3YNR007C ECM34P38728 170 aa2.45□□□□□ -2.02
ATG3YNR007C THO1P40040 218 aaKnown RBP2.45□□□□□ -2.02
ATG3YNR007C YER188WP40103 239 aa2.45□□□□□ -2.02
ATG3YNR007C HAC1P41546 238 aa2.45□□□□□ -2.02
ATG3YNR007C YFR057WP43625 151 aa2.45□□□□□ -2.02
ATG3YNR007C YGR016WP53209 190 aa2.45□□□□□ -2.02
ATG3YNR007C COS1P53822 381 aa2.45□□□□□ -2.02
ATG3YNR007C YNL046WP53956 172 aa2.45□□□□□ -2.02
ATG3YNR007C YNL033WP53964 284 aa2.45□□□□□ -2.02
ATG3YNR007C YNL019CP53975 284 aa2.45□□□□□ -2.02
ATG3YNR007C DML1Q03652 475 aa2.45□□□□□ -2.02
ATG3YNR007C ASA1Q06822 443 aa2.45□□□□□ -2.02
ATG3YNR007C IZH2Q12442 317 aa2.45□□□□□ -2.02
ATG3YNR007C YKL018C-AQ3E7A7 99 aa2.45□□□□□ -2.02
ATG3YNR007C FSH3Q99369 266 aa2.45□□□□□ -2.02
ATG3YNR007C TDH2P00358 332 aaKnown RBP2.44□□□□□ -2.02
ATG3YNR007C TDH3P00359 332 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 109.2 ms