RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YCR101CP25607 182 aa3.38□□□□□ -1.87
ECM16YMR128W ARO4P32449 370 aaKnown RBP3.38□□□□□ -1.87
ECM16YMR128W SSS1P35179 80 aa3.38□□□□□ -1.87
ECM16YMR128W MED6P38782 295 aa3.38□□□□□ -1.87
ECM16YMR128W YIL108WP40483 696 aaKnown RBP3.38□□□□□ -1.87
ECM16YMR128W NIF3P53081 288 aa3.38□□□□□ -1.87
ECM16YMR128W SYM1Q06563 197 aa3.38□□□□□ -1.87
ECM16YMR128W YOL073CQ08232 322 aa3.38□□□□□ -1.87
ECM16YMR128W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
ECM16YMR128W AHC1Q12433 566 aa3.38□□□□□ -1.87
ECM16YMR128W BRR2P32639 2163 aaKnown RBP3.38□□□□□ -1.87
ECM16YMR128W URA6P15700 204 aa3.37□□□□□ -1.87
ECM16YMR128W TRM7P38238 310 aaKnown RBP3.37□□□□□ -1.87
ECM16YMR128W GPI16P38875 610 aa3.37□□□□□ -1.87
ECM16YMR128W RTS2P40962 232 aa3.37□□□□□ -1.87
ECM16YMR128W ADO1P47143 340 aaKnown RBP3.37□□□□□ -1.87
ECM16YMR128W ASK10P48361 1146 aa3.37□□□□□ -1.87
ECM16YMR128W CTF19Q02732 369 aa3.37□□□□□ -1.87
ECM16YMR128W VPS68Q12016 184 aa3.37□□□□□ -1.87
ECM16YMR128W MET3P08536 511 aa3.37□□□□□ -1.87
ECM16YMR128W PPA2P28239 310 aa3.37□□□□□ -1.87
ECM16YMR128W SNC2P33328 115 aa3.37□□□□□ -1.87
ECM16YMR128W OMA1P36163 345 aa3.37□□□□□ -1.87
ECM16YMR128W TRR2P38816 342 aa3.37□□□□□ -1.87
ECM16YMR128W FLO5P38894 1075 aa3.37□□□□□ -1.87
ECM16YMR128W IRC24P40580 263 aa3.37□□□□□ -1.87
ECM16YMR128W BNS1P50084 137 aa3.37□□□□□ -1.87
ECM16YMR128W BRR6P53062 197 aa3.37□□□□□ -1.87
ECM16YMR128W YGL185CP53100 379 aa3.37□□□□□ -1.87
ECM16YMR128W YPL108WQ02872 168 aaPredicted RBP3.37□□□□□ -1.87
ECM16YMR128W YDR387CQ04162 555 aa3.37□□□□□ -1.87
ECM16YMR128W YPR063CQ12160 140 aa3.37□□□□□ -1.87
ECM16YMR128W COX19Q3E731 98 aa3.37□□□□□ -1.87
ECM16YMR128W CHO1P08456 276 aa3.37□□□□□ -1.87
ECM16YMR128W RPL20AP0CX23 172 aaKnown RBP3.37□□□□□ -1.87
ECM16YMR128W RPL20BP0CX24 172 aaPredicted RBP3.37□□□□□ -1.87
ECM16YMR128W ELO2P25358 347 aa3.37□□□□□ -1.87
ECM16YMR128W ADH7P25377 361 aa3.37□□□□□ -1.87
ECM16YMR128W SRB5P32585 307 aa3.37□□□□□ -1.87
ECM16YMR128W LNP1P38878 278 aa3.37□□□□□ -1.87
ECM16YMR128W PSD1P39006 500 aa3.37□□□□□ -1.87
ECM16YMR128W POG1P40473 351 aa3.37□□□□□ -1.87
ECM16YMR128W YIL067CP40514 678 aa3.37□□□□□ -1.87
ECM16YMR128W YLR146W-AQ2V2P1 62 aa3.37□□□□□ -1.87
ECM16YMR128W INH1P01097 85 aa3.36□□□□□ -1.87
ECM16YMR128W YKR104WP0CE69 306 aa3.36□□□□□ -1.87
ECM16YMR128W MGR1P25573 417 aa3.36□□□□□ -1.87
ECM16YMR128W DCG1P32460 244 aa3.36□□□□□ -1.87
ECM16YMR128W FIG1P38224 298 aa3.36□□□□□ -1.87
ECM16YMR128W EHT1P38295 451 aa3.36□□□□□ -1.87
ECM16YMR128W SYS1P41544 203 aa3.36□□□□□ -1.87
ECM16YMR128W FLC3P53121 802 aa3.36□□□□□ -1.87
ECM16YMR128W YGL114WP53134 725 aa3.36□□□□□ -1.87
ECM16YMR128W SMM1P53720 384 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W GIM3P53900 129 aa3.36□□□□□ -1.87
ECM16YMR128W ACT1P60010 375 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W AKR2Q12013 749 aa3.36□□□□□ -1.87
ECM16YMR128W YOR015WQ12169 119 aa3.36□□□□□ -1.87
ECM16YMR128W RPL1AP0CX43 217 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W RPL1BP0CX44 217 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W MXR2P25566 168 aa3.36□□□□□ -1.87
ECM16YMR128W PAD1P33751 242 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
ECM16YMR128W ERV14P53173 138 aa3.36□□□□□ -1.87
ECM16YMR128W APJ1P53940 528 aa3.36□□□□□ -1.87
ECM16YMR128W LUC7Q07508 261 aaPredicted RBP3.36□□□□□ -1.87
ECM16YMR128W NAG1Q8TGN9 163 aa3.36□□□□□ -1.87
ECM16YMR128W PET20Q99373 253 aa3.36□□□□□ -1.87
ECM16YMR128W RIP1P08067 215 aa3.36□□□□□ -1.87
ECM16YMR128W CPR5P35176 225 aa3.36□□□□□ -1.87
ECM16YMR128W COS9P36034 407 aa3.36□□□□□ -1.87
ECM16YMR128W FMP46P36141 133 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W MRPL28P36527 147 aa3.36□□□□□ -1.87
ECM16YMR128W YPT10P38146 199 aa3.36□□□□□ -1.87
ECM16YMR128W SEN34P39707 275 aa3.36□□□□□ -1.87
ECM16YMR128W ZIM17P42844 174 aa3.36□□□□□ -1.87
ECM16YMR128W AIM24P47127 394 aa3.36□□□□□ -1.87
ECM16YMR128W RMD9P53140 646 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W YIF1P53845 314 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W EGD1Q02642 157 aaKnown RBP3.36□□□□□ -1.87
ECM16YMR128W YHM2Q04013 314 aa3.36□□□□□ -1.87
ECM16YMR128W SMA2Q04658 369 aa3.36□□□□□ -1.87
ECM16YMR128W PRM4Q12498 284 aa3.36□□□□□ -1.87
ECM16YMR128W DIF1O13577 133 aa3.35□□□□□ -1.87
ECM16YMR128W DAL80P26343 269 aa3.35□□□□□ -1.87
ECM16YMR128W RPL14AP36105 138 aaKnown RBP3.35□□□□□ -1.87
ECM16YMR128W AVT5P38176 459 aa3.35□□□□□ -1.87
ECM16YMR128W RPL14BP38754 138 aaKnown RBP3.35□□□□□ -1.87
ECM16YMR128W RMD6P39975 231 aa3.35□□□□□ -1.87
ECM16YMR128W DLS1P40366 167 aa3.35□□□□□ -1.87
ECM16YMR128W AVT7P40501 490 aa3.35□□□□□ -1.87
ECM16YMR128W LSB3P43603 459 aaKnown RBP3.35□□□□□ -1.87
ECM16YMR128W TIM21P53220 239 aa3.35□□□□□ -1.87
ECM16YMR128W MPA43P53583 542 aaPredicted RBP3.35□□□□□ -1.87
ECM16YMR128W PET191Q02772 108 aa3.35□□□□□ -1.87
ECM16YMR128W YML018CQ03730 393 aa3.35□□□□□ -1.87
ECM16YMR128W PML1Q07930 204 aaPredicted RBP3.35□□□□□ -1.87
ECM16YMR128W ZEO1Q08245 113 aa3.35□□□□□ -1.87
ECM16YMR128W FAB1P34756 2278 aa3.35□□□□□ -1.87
ECM16YMR128W URK1P27515 501 aa3.35□□□□□ -1.87
ECM16YMR128W GAR1P28007 205 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms