RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	HAC1	P41546	238 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	KEG1	P43614	200 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	YDL186W	P48568	277 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	USE1	P53146	245 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	MRX11	Q03079	207 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	MED2	Q12124	431 aa		0.98	□□□□□ -2.25
CLU1	YMR012W	SPT3	P06844	337 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	MIR1	P23641	311 aa	Known RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	AYR1	P40471	297 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	LSG1	P53145	640 aa	Known RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	SYF2	P53277	215 aa	Predicted RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	BOR1	P53838	576 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	SWF1	Q04629	336 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	BER1	Q06688	274 aa	Known RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	ESA1	Q08649	445 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	BAG7	Q12128	409 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	SRN2	Q99176	213 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	DPB2	P24482	689 aa	Predicted RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	SFK1	P35735	353 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected
CLU1	YMR012W	HOT13	P36078	116 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	MAK5	P38112	773 aa	Predicted RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	YHL049C	P38722	271 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	CIS3	P47001	227 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	MST27	P53176	234 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	DIA1	P54005	336 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	MRPS17	Q03246	237 aa	Predicted RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	SCS7	Q03529	384 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	FYV12	Q08559	129 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	YOR114W	Q12219	294 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	CMC2	Q3E7A4	109 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	IZH4	Q99393	312 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	MRS3	P10566	314 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	ILV6	P25605	309 aa	Known RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	YHI9	P38765	294 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	BDH2	P39713	417 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	YJR054W	P47114	497 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	AIM34	Q03673	198 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	YHC1	Q05900	231 aa	Known RBP	0.97	□□□□□ -2.25
CLU1	YMR012W	TPO4	Q12256	659 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	YLR108C	Q12259	485 aa		0.97	□□□□□ -2.25
CLU1	YMR012W	SEC22	P22214	214 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	LSB5	P25369	354 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	KTI12	P34253	313 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	GIM4	P40005	111 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	PIN3	Q06449	215 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	YBL008W-A	Q3E821	79 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	ARG4	P04076	463 aa	Predicted RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	QCR2	P07257	368 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	RBK1	P25332	333 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	GSP1	P32835	219 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	GSP2	P32836	220 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	RRB1	Q04225	511 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	FMP42	Q04991	504 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	MCH1	Q07376	486 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	BGL2	P15703	313 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	CDC50	P25656	391 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	RPL16A	P26784	199 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	LOS1	P33418	1100 aa	Predicted RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	ARN2	P38724	620 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	ARN1	P38731	627 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	YHR127W	P38833	243 aa	Known RBP	0.96	□□□□□ -2.26
CLU1	YMR012W	ECM1	P39715	212 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	FMC1	P40491	155 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	SER33	P40510	469 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	YJR015W	P47090	510 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	ECI1	Q05871	280 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	DXO1	Q06349	442 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	SLD7	Q08457	257 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	MMT2	Q08970	484 aa		0.96	□□□□□ -2.26
CLU1	YMR012W	SIR2	P06700	562 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	FAR1	P21268	830 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	EPT1	P22140	391 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	YCR023C	P25351	611 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	ADE1	P27616	306 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	TIP1	P27654	210 aa	Predicted RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	URA8	P38627	578 aa	Predicted RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	KRE29	P40026	464 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	SWC4	P53201	476 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	PRM6	Q04705	352 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	SRL2	Q12020	392 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	AYT1	Q12226	474 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	HTZ1	Q12692	134 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	ATP6	P00854	259 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	FCY2	P17064	533 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	CHA1	P25379	360 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	RPS5	P26783	225 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	GPX1	P36014	167 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	MRP21	P38175	177 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	SFH5	P47008	294 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	BCH1	Q05029	724 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	YPR091C	Q06833	770 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	OSW1	Q08692	278 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	TPT1	Q12272	230 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	ARP6	Q12509	438 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	YFR032C-B	Q8TGU2	87 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	BI3	Q9ZZW7	517 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	YJL197C-A	P0C5P0	93 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	MCK1	P21965	375 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	CPR4	P25334	318 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms