RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C CDC10P25342 322 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C YCR102CP25608 368 aa1.74□□□□□ -2.13
SHE2YKL130C RPB9P27999 122 aa1.74□□□□□ -2.13
SHE2YKL130C EHD3P28817 500 aa1.74□□□□□ -2.13
SHE2YKL130C YKL075CP36083 450 aa1.74□□□□□ -2.13
SHE2YKL130C DRE2P36152 348 aa1.74□□□□□ -2.13
SHE2YKL130C YBR096WP38256 230 aa1.74□□□□□ -2.13
SHE2YKL130C GOS1P38736 223 aa1.74□□□□□ -2.13
SHE2YKL130C RTC3P38804 111 aaPredicted RBP1.74□□□□□ -2.13
SHE2YKL130C YHR127WP38833 243 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C RFC4P40339 323 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C SNZ3P43545 298 aa1.74□□□□□ -2.13
SHE2YKL130C RAD17P48581 401 aa1.74□□□□□ -2.13
SHE2YKL130C MIC26P50087 233 aa1.74□□□□□ -2.13
SHE2YKL130C UFD1P53044 361 aa1.74□□□□□ -2.13
SHE2YKL130C RSM27P53305 110 aa1.74□□□□□ -2.13
SHE2YKL130C SNZ2P53824 298 aa1.74□□□□□ -2.13
SHE2YKL130C CTF19Q02732 369 aa1.74□□□□□ -2.13
SHE2YKL130C YMR166CQ03829 368 aa1.74□□□□□ -2.13
SHE2YKL130C TVP15Q03860 143 aa1.74□□□□□ -2.13
SHE2YKL130C GET4Q12125 312 aa1.74□□□□□ -2.13
SHE2YKL130C YPL150WQ12152 901 aa1.74□□□□□ -2.13
SHE2YKL130C TIR4Q12218 487 aaPredicted RBP1.74□□□□□ -2.13
SHE2YKL130C PDR5P33302 1511 aaKnown RBP1.74□□□□□ -2.13
SHE2YKL130C YBT1P32386 1661 aa1.74□□□□□ -2.13
SHE2YKL130C IML1P47170 1584 aa1.73□□□□□ -2.13
SHE2YKL130C IKI3Q06706 1349 aaKnown RBP1.73□□□□□ -2.13
SHE2YKL130C CPT1P17898 393 aa1.73□□□□□ -2.13
SHE2YKL130C GDH2P33327 1092 aaKnown RBP1.73□□□□□ -2.13
SHE2YKL130C CSG2P35206 410 aa1.73□□□□□ -2.13
SHE2YKL130C CBT1P36038 271 aaPredicted RBP1.73□□□□□ -2.13
SHE2YKL130C URA8P38627 578 aaPredicted RBP1.73□□□□□ -2.13
SHE2YKL130C YHB1P39676 399 aaKnown RBP1.73□□□□□ -2.13
SHE2YKL130C SEO1P39709 593 aa1.73□□□□□ -2.13
SHE2YKL130C BDH1P39714 382 aa1.73□□□□□ -2.13
SHE2YKL130C ERG28P40030 148 aa1.73□□□□□ -2.13
SHE2YKL130C YMR144WP40214 342 aaKnown RBP1.73□□□□□ -2.13
SHE2YKL130C MRH4P53166 561 aa1.73□□□□□ -2.13
SHE2YKL130C YGR067CP53243 804 aa1.73□□□□□ -2.13
SHE2YKL130C CUS2P53830 285 aaPredicted RBP1.73□□□□□ -2.13
SHE2YKL130C SMD1Q02260 146 aaPredicted RBP1.73□□□□□ -2.13
SHE2YKL130C GOT1Q03554 138 aa1.73□□□□□ -2.13
SHE2YKL130C YDR124WQ04608 324 aa1.73□□□□□ -2.13
SHE2YKL130C CDC123Q05791 360 aa1.73□□□□□ -2.13
SHE2YKL130C PIN3Q06449 215 aa1.73□□□□□ -2.13
SHE2YKL130C RRP40Q08285 240 aaKnown RBP1.73□□□□□ -2.13
SHE2YKL130C YKL183C-AQ3E765 70 aa1.73□□□□□ -2.13
SHE2YKL130C SPT3P06844 337 aa1.72□□□□□ -2.13
SHE2YKL130C BCY1P07278 416 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C COS2P0CX12 379 aa1.72□□□□□ -2.13
SHE2YKL130C COS3P0CX13 379 aa1.72□□□□□ -2.13
SHE2YKL130C CUP2P15315 225 aa1.72□□□□□ -2.13
SHE2YKL130C MGM101P32787 269 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C NTF2P33331 125 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C MID2P36027 376 aa1.72□□□□□ -2.13
SHE2YKL130C SSH1P38353 490 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C TRR2P38816 342 aa1.72□□□□□ -2.13
SHE2YKL130C YNL194CP40169 301 aa1.72□□□□□ -2.13
SHE2YKL130C COS4P43542 379 aa1.72□□□□□ -2.13
SHE2YKL130C HAM1P47119 197 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C MCM22P47167 239 aa1.72□□□□□ -2.13
SHE2YKL130C NSA1P53136 463 aaPredicted RBP1.72□□□□□ -2.13
SHE2YKL130C FYV6P53913 173 aa1.72□□□□□ -2.13
SHE2YKL130C OSH6Q02201 448 aa1.72□□□□□ -2.13
SHE2YKL130C ECM11Q04110 302 aa1.72□□□□□ -2.13
SHE2YKL130C YMR114CQ04471 368 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C SEI1Q06058 285 aa1.72□□□□□ -2.13
SHE2YKL130C HEM25Q07534 307 aa1.72□□□□□ -2.13
SHE2YKL130C SYC1Q08553 188 aaPredicted RBP1.72□□□□□ -2.13
SHE2YKL130C YDL211CQ12121 372 aa1.72□□□□□ -2.13
SHE2YKL130C YRA1Q12159 226 aaKnown RBP1.72□□□□□ -2.13
SHE2YKL130C YLR126CQ12288 251 aa1.72□□□□□ -2.13
SHE2YKL130C YPS3Q12303 508 aa1.72□□□□□ -2.13
SHE2YKL130C JLP1Q12358 412 aa1.72□□□□□ -2.13
SHE2YKL130C ATG5Q12380 294 aa1.72□□□□□ -2.13
SHE2YKL130C DCN1Q12395 269 aa1.72□□□□□ -2.13
SHE2YKL130C YBL008W-AQ3E821 79 aa1.72□□□□□ -2.13
SHE2YKL130C NUP188P52593 1655 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C YEL009C-AA0A023PZF2 135 aa1.71□□□□□ -2.14
SHE2YKL130C RPL28P02406 149 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C RPL27AP0C2H6 136 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C RPL27BP0C2H7 136 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C SNA3P14359 133 aa1.71□□□□□ -2.14
SHE2YKL130C YAK1P14680 807 aa1.71□□□□□ -2.14
SHE2YKL130C MER1P16523 270 aa1.71□□□□□ -2.14
SHE2YKL130C YPK2P18961 677 aa1.71□□□□□ -2.14
SHE2YKL130C IDH1P28834 360 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SHE2YKL130C BMH1P29311 267 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C CAB3P36076 571 aa1.71□□□□□ -2.14
SHE2YKL130C TRM7P38238 310 aaKnown RBP1.71□□□□□ -2.14
SHE2YKL130C ARN2P38724 620 aa1.71□□□□□ -2.14
SHE2YKL130C SPL2P38839 148 aa1.71□□□□□ -2.14
SHE2YKL130C TEM1P38987 245 aa1.71□□□□□ -2.14
SHE2YKL130C SUR2P38992 349 aa1.71□□□□□ -2.14
SHE2YKL130C YRB2P40517 327 aa1.71□□□□□ -2.14
SHE2YKL130C CPR7P47103 393 aa1.71□□□□□ -2.14
SHE2YKL130C TRM9P49957 279 aa1.71□□□□□ -2.14
SHE2YKL130C CWC23P52868 283 aaPredicted RBP1.71□□□□□ -2.14
SHE2YKL130C NIF3P53081 288 aa1.71□□□□□ -2.14
SHE2YKL130C FLC3P53121 802 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms