RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A COX5AP00424 153 aa2.2□□□□□ -2.06
SFT1YKL006C-A CDC28P00546 298 aaKnown RBP2.2□□□□□ -2.06
SFT1YKL006C-A ERD2P18414 219 aa2.2□□□□□ -2.06
SFT1YKL006C-A PHO89P38361 574 aa2.2□□□□□ -2.06
SFT1YKL006C-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SFT1YKL006C-A EDC2P40023 145 aaPredicted RBP2.2□□□□□ -2.06
SFT1YKL006C-A PEX17P40155 199 aa2.2□□□□□ -2.06
SFT1YKL006C-A POG1P40473 351 aa2.2□□□□□ -2.06
SFT1YKL006C-A IRC18P47056 224 aa2.2□□□□□ -2.06
SFT1YKL006C-A YGL159WP53110 370 aa2.2□□□□□ -2.06
SFT1YKL006C-A MMS2P53152 137 aa2.2□□□□□ -2.06
SFT1YKL006C-A YIP3P53633 176 aa2.2□□□□□ -2.06
SFT1YKL006C-A SWT21P53873 357 aaPredicted RBP2.2□□□□□ -2.06
SFT1YKL006C-A GOT1Q03554 138 aa2.2□□□□□ -2.06
SFT1YKL006C-A MSA1Q08471 629 aa2.2□□□□□ -2.06
SFT1YKL006C-A SYC1Q08553 188 aaPredicted RBP2.2□□□□□ -2.06
SFT1YKL006C-A YOR186WQ08560 144 aa2.2□□□□□ -2.06
SFT1YKL006C-A YAL067W-AQ8TGK6 75 aa2.2□□□□□ -2.06
SFT1YKL006C-A YHR139C-AO13536 103 aa2.19□□□□□ -2.06
SFT1YKL006C-A YOL163WP0CF20 169 aa2.19□□□□□ -2.06
SFT1YKL006C-A RPB9P27999 122 aa2.19□□□□□ -2.06
SFT1YKL006C-A OAC1P32332 324 aa2.19□□□□□ -2.06
SFT1YKL006C-A ERG2P32352 222 aa2.19□□□□□ -2.06
SFT1YKL006C-A VPS51P36116 164 aa2.19□□□□□ -2.06
SFT1YKL006C-A MIC19P43594 170 aa2.19□□□□□ -2.06
SFT1YKL006C-A BXI1P48558 297 aa2.19□□□□□ -2.06
SFT1YKL006C-A YGL118CP53132 145 aa2.19□□□□□ -2.06
SFT1YKL006C-A PDR17P53844 350 aa2.19□□□□□ -2.06
SFT1YKL006C-A YDR124WQ04608 324 aa2.19□□□□□ -2.06
SFT1YKL006C-A ECM19Q06011 112 aa2.19□□□□□ -2.06
SFT1YKL006C-A YPL150WQ12152 901 aa2.19□□□□□ -2.06
SFT1YKL006C-A SWI1P09547 1314 aa2.18□□□□□ -2.06
SFT1YKL006C-A CSG2P35206 410 aa2.18□□□□□ -2.06
SFT1YKL006C-A DBP7P36120 742 aaKnown RBP2.18□□□□□ -2.06
SFT1YKL006C-A YBL081WP38180 368 aaKnown RBP2.18□□□□□ -2.06
SFT1YKL006C-A YHI9P38765 294 aa2.18□□□□□ -2.06
SFT1YKL006C-A COG3P40094 801 aa2.18□□□□□ -2.06
SFT1YKL006C-A UFD1P53044 361 aa2.18□□□□□ -2.06
SFT1YKL006C-A YPL039WQ03080 316 aa2.18□□□□□ -2.06
SFT1YKL006C-A PRM15Q03262 622 aa2.18□□□□□ -2.06
SFT1YKL006C-A YMR279CQ03263 540 aa2.18□□□□□ -2.06
SFT1YKL006C-A EMI1Q04406 187 aa2.18□□□□□ -2.06
SFT1YKL006C-A YNG1Q08465 219 aa2.18□□□□□ -2.06
SFT1YKL006C-A USB1Q12208 290 aaKnown RBP2.18□□□□□ -2.06
SFT1YKL006C-A TIM22Q12328 207 aa2.18□□□□□ -2.06
SFT1YKL006C-A YBL008W-AQ3E821 79 aa2.18□□□□□ -2.06
SFT1YKL006C-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SFT1YKL006C-A APS1P35181 156 aa2.17□□□□□ -2.06
SFT1YKL006C-A YHL044WP38727 235 aa2.17□□□□□ -2.06
SFT1YKL006C-A TRR2P38816 342 aa2.17□□□□□ -2.06
SFT1YKL006C-A ASP1P38986 381 aaPredicted RBP2.17□□□□□ -2.06
SFT1YKL006C-A SUR2P38992 349 aa2.17□□□□□ -2.06
SFT1YKL006C-A YER121WP40076 114 aa2.17□□□□□ -2.06
SFT1YKL006C-A SYS1P41544 203 aa2.17□□□□□ -2.06
SFT1YKL006C-A RPE1P46969 238 aa2.17□□□□□ -2.06
SFT1YKL006C-A YJL028WP47062 111 aa2.17□□□□□ -2.06
SFT1YKL006C-A SNO1Q03144 224 aa2.17□□□□□ -2.06
SFT1YKL006C-A YDR248CQ03786 193 aa2.17□□□□□ -2.06
SFT1YKL006C-A YLR179CQ06252 201 aaKnown RBP2.17□□□□□ -2.06
SFT1YKL006C-A YET3Q07451 203 aa2.17□□□□□ -2.06
SFT1YKL006C-A YPR011CQ12251 326 aa2.17□□□□□ -2.06
SFT1YKL006C-A ATG5Q12380 294 aa2.17□□□□□ -2.06
SFT1YKL006C-A FLO11P08640 1367 aa2.17□□□□□ -2.06
SFT1YKL006C-A DRS2P39524 1355 aa2.17□□□□□ -2.06
SFT1YKL006C-A PAN1P32521 1480 aa2.16□□□□□ -2.06
SFT1YKL006C-A SEC4P07560 215 aaKnown RBP2.16□□□□□ -2.06
SFT1YKL006C-A GCN3P14741 305 aa2.16□□□□□ -2.06
SFT1YKL006C-A COX10P21592 462 aa2.16□□□□□ -2.06
SFT1YKL006C-A UBC6P33296 250 aaPredicted RBP2.16□□□□□ -2.06
SFT1YKL006C-A MRPL28P36527 147 aa2.16□□□□□ -2.06
SFT1YKL006C-A ECM13P38195 257 aa2.16□□□□□ -2.06
SFT1YKL006C-A FES1P38260 290 aa2.16□□□□□ -2.06
SFT1YKL006C-A SHG1P38337 142 aa2.16□□□□□ -2.06
SFT1YKL006C-A SRP14P38985 146 aa2.16□□□□□ -2.06
SFT1YKL006C-A ERV29P53337 310 aa2.16□□□□□ -2.06
SFT1YKL006C-A YNL140CP53910 189 aa2.16□□□□□ -2.06
SFT1YKL006C-A YLR460CP54007 376 aa2.16□□□□□ -2.06
SFT1YKL006C-A OSH6Q02201 448 aa2.16□□□□□ -2.06
SFT1YKL006C-A NNT1Q05874 261 aa2.16□□□□□ -2.06
SFT1YKL006C-A AGC1Q12482 902 aa2.16□□□□□ -2.06
SFT1YKL006C-A YBL112CQ3E7Y4 105 aa2.16□□□□□ -2.06
SFT1YKL006C-A PUT1P09368 476 aa2.15□□□□□ -2.07
SFT1YKL006C-A YAK1P14680 807 aa2.15□□□□□ -2.07
SFT1YKL006C-A CKA2P19454 339 aa2.15□□□□□ -2.07
SFT1YKL006C-A SEC22P22214 214 aa2.15□□□□□ -2.07
SFT1YKL006C-A PRE7P23724 241 aaKnown RBP2.15□□□□□ -2.07
SFT1YKL006C-A TRR1P29509 319 aaKnown RBP2.15□□□□□ -2.07
SFT1YKL006C-A CAF4P36130 643 aa2.15□□□□□ -2.07
SFT1YKL006C-A ECM33P38248 429 aaKnown RBP2.15□□□□□ -2.07
SFT1YKL006C-A ECM14P38836 430 aa2.15□□□□□ -2.07
SFT1YKL006C-A YIL054WP40524 105 aa2.15□□□□□ -2.07
SFT1YKL006C-A YKE4P40544 346 aa2.15□□□□□ -2.07
SFT1YKL006C-A MRPL49P40858 161 aaPredicted RBP2.15□□□□□ -2.07
SFT1YKL006C-A CAT5P41735 233 aa2.15□□□□□ -2.07
SFT1YKL006C-A UFE1P41834 346 aa2.15□□□□□ -2.07
SFT1YKL006C-A FAR7P43592 221 aa2.15□□□□□ -2.07
SFT1YKL006C-A YJL016WP47072 561 aa2.15□□□□□ -2.07
SFT1YKL006C-A YJR056CP47115 236 aa2.15□□□□□ -2.07
SFT1YKL006C-A CAX4P53223 239 aa2.15□□□□□ -2.07
SFT1YKL006C-A NRK1P53915 240 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms