RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C ECM18Q04623 453 aa5.13□□□□□ -1.59
SFB3YHR098C YML053CQ04978 212 aa5.13□□□□□ -1.59
SFB3YHR098C MSC3Q05812 728 aa5.13□□□□□ -1.59
SFB3YHR098C TDA6Q06466 467 aa5.13□□□□□ -1.59
SFB3YHR098C STP4Q07351 490 aa5.13□□□□□ -1.59
SFB3YHR098C YLR146W-AQ2V2P1 62 aa5.13□□□□□ -1.59
SFB3YHR098C GDH1P07262 454 aaKnown RBP5.13□□□□□ -1.59
SFB3YHR098C PRO1P32264 428 aa5.13□□□□□ -1.59
SFB3YHR098C TRR2P38816 342 aa5.13□□□□□ -1.59
SFB3YHR098C AMA1P50082 593 aa5.13□□□□□ -1.59
SFB3YHR098C YPL014WQ02606 381 aa5.13□□□□□ -1.59
SFB3YHR098C VPS28Q02767 242 aa5.13□□□□□ -1.59
SFB3YHR098C TMA23Q03525 211 aa5.13□□□□□ -1.59
SFB3YHR098C UPS3Q04006 179 aa5.13□□□□□ -1.59
SFB3YHR098C RTT103Q05543 409 aa5.13□□□□□ -1.59
SFB3YHR098C CET1O13297 549 aaPredicted RBP5.12□□□□□ -1.59
SFB3YHR098C PUT3P25502 979 aaPredicted RBP5.12□□□□□ -1.59
SFB3YHR098C YCR100CP25606 316 aa5.12□□□□□ -1.59
SFB3YHR098C MSS51P32335 436 aa5.12□□□□□ -1.59
SFB3YHR098C POP8P38208 133 aa5.12□□□□□ -1.59
SFB3YHR098C JJJ3P47138 172 aa5.12□□□□□ -1.59
SFB3YHR098C PIN3Q06449 215 aa5.12□□□□□ -1.59
SFB3YHR098C RDR1Q08904 546 aa5.12□□□□□ -1.59
SFB3YHR098C YPR011CQ12251 326 aa5.12□□□□□ -1.59
SFB3YHR098C PAU19P0CE85 124 aa5.12□□□□□ -1.59
SFB3YHR098C PAU21P0CE86 164 aa5.12□□□□□ -1.59
SFB3YHR098C PAU22P0CE87 164 aa5.12□□□□□ -1.59
SFB3YHR098C ELO2P25358 347 aa5.12□□□□□ -1.59
SFB3YHR098C NFS1P25374 497 aa5.12□□□□□ -1.59
SFB3YHR098C PAU3P25610 124 aa5.12□□□□□ -1.59
SFB3YHR098C YKL075CP36083 450 aa5.12□□□□□ -1.59
SFB3YHR098C CBP4P37267 147 aa5.12□□□□□ -1.59
SFB3YHR098C MMF1P40185 145 aaKnown RBP5.12□□□□□ -1.59
SFB3YHR098C YJR011CP47086 261 aaPredicted RBP5.12□□□□□ -1.59
SFB3YHR098C CGI121Q03705 181 aaKnown RBP5.12□□□□□ -1.59
SFB3YHR098C ERP1Q05359 219 aaKnown RBP5.12□□□□□ -1.59
SFB3YHR098C YLR456WQ06199 204 aa5.12□□□□□ -1.59
SFB3YHR098C YOP1Q12402 180 aa5.12□□□□□ -1.59
SFB3YHR098C AIM45Q12480 344 aaKnown RBP5.12□□□□□ -1.59
SFB3YHR098C COX5BP00425 151 aa5.11□□□□□ -1.59
SFB3YHR098C DDI2P0CH63 225 aa5.11□□□□□ -1.59
SFB3YHR098C DDI3P0CH64 225 aa5.11□□□□□ -1.59
SFB3YHR098C MET30P39014 640 aa5.11□□□□□ -1.59
SFB3YHR098C BDH1P39714 382 aa5.11□□□□□ -1.59
SFB3YHR098C SPC25P40014 221 aa5.11□□□□□ -1.59
SFB3YHR098C CIN2P46670 268 aa5.11□□□□□ -1.59
SFB3YHR098C TRM112P53738 135 aaPredicted RBP5.11□□□□□ -1.59
SFB3YHR098C YNR066CP53752 436 aa5.11□□□□□ -1.59
SFB3YHR098C YPL257WQ08974 193 aa5.11□□□□□ -1.59
SFB3YHR098C YOR015WQ12169 119 aa5.11□□□□□ -1.59
SFB3YHR098C LAS17Q12446 633 aa5.11□□□□□ -1.59
SFB3YHR098C SCH9P11792 824 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C BGL2P15703 313 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C LSB5P25369 354 aa5.11□□□□□ -1.59
SFB3YHR098C ERV1P27882 189 aa5.11□□□□□ -1.59
SFB3YHR098C GLC7P32598 312 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C CSE2P33308 149 aa5.11□□□□□ -1.59
SFB3YHR098C PPZ2P33329 710 aa5.11□□□□□ -1.59
SFB3YHR098C YHR097CP38809 366 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C SKN7P38889 622 aa5.11□□□□□ -1.59
SFB3YHR098C NSA2P40078 261 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C YDL183CP48569 320 aa5.11□□□□□ -1.59
SFB3YHR098C TAF4P50105 388 aa5.11□□□□□ -1.59
SFB3YHR098C HST3P53687 447 aa5.11□□□□□ -1.59
SFB3YHR098C YNL260CP53846 198 aa5.11□□□□□ -1.59
SFB3YHR098C YNL143CP53908 130 aa5.11□□□□□ -1.59
SFB3YHR098C LEU9Q12166 604 aaKnown RBP5.11□□□□□ -1.59
SFB3YHR098C YOR338WQ99326 363 aa5.11□□□□□ -1.59
SFB3YHR098C ILV5P06168 395 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C YOL162WP0CF19 215 aa5.1□□□□□ -1.59
SFB3YHR098C YAR066WP0CX18 203 aa5.1□□□□□ -1.59
SFB3YHR098C YHR214WP0CX19 203 aa5.1□□□□□ -1.59
SFB3YHR098C SLM5P25345 492 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C SUA7P29055 345 aaPredicted RBP5.1□□□□□ -1.59
SFB3YHR098C ALK2P32789 676 aaPredicted RBP5.1□□□□□ -1.59
SFB3YHR098C YPC1P38298 316 aa5.1□□□□□ -1.59
SFB3YHR098C ARC40P38328 384 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C DLS1P40366 167 aa5.1□□□□□ -1.59
SFB3YHR098C LOC1P43586 204 aaPredicted RBP5.1□□□□□ -1.59
SFB3YHR098C BAT2P47176 376 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C YGL262WP53054 175 aa5.1□□□□□ -1.59
SFB3YHR098C NIF3P53081 288 aa5.1□□□□□ -1.59
SFB3YHR098C RMD9P53140 646 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C TRX3P25372 127 aa5.1□□□□□ -1.59
SFB3YHR098C MRPS9P38120 278 aa5.1□□□□□ -1.59
SFB3YHR098C RRN10P38204 145 aa5.1□□□□□ -1.59
SFB3YHR098C SGN1P40561 250 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SFB3YHR098C XYL2Q07993 356 aa5.1□□□□□ -1.59
SFB3YHR098C COQ10Q08058 207 aa5.1□□□□□ -1.59
SFB3YHR098C SWM1Q12379 170 aa5.1□□□□□ -1.59
SFB3YHR098C ODC2Q99297 307 aa5.1□□□□□ -1.59
SFB3YHR098C MRS4P23500 304 aa5.1□□□□□ -1.59
SFB3YHR098C DCG1P32460 244 aa5.1□□□□□ -1.59
SFB3YHR098C UPS2P35200 230 aa5.1□□□□□ -1.59
SFB3YHR098C PHO11P35842 467 aa5.1□□□□□ -1.59
SFB3YHR098C MRPL27P36526 146 aaPredicted RBP5.1□□□□□ -1.59
SFB3YHR098C CUE1P38428 203 aa5.1□□□□□ -1.59
SFB3YHR098C PHO12P38693 467 aa5.1□□□□□ -1.59
SFB3YHR098C GIM4P40005 111 aaKnown RBP5.1□□□□□ -1.59
SFB3YHR098C JHD1P40034 492 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms