RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	CAX4	P53223	239 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	SLX9	P53251	210 aa	Predicted RBP	3.17	□□□□□ -1.9
TDA3	YHR009C	RHO3	Q00245	231 aa	Known RBP	3.17	□□□□□ -1.9
TDA3	YHR009C	TRM732	Q03496	1420 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	GET4	Q12125	312 aa		3.17	□□□□□ -1.9
TDA3	YHR009C	NUP170	P38181	1502 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	DSF1	P0CX08	502 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	YNR073C	P0CX09	502 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	FUS3	P16892	353 aa	Known RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	ERG2	P32352	222 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	YBL010C	P32788	280 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	NTF2	P33331	125 aa	Known RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	YHI9	P38765	294 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	SUR2	P38992	349 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	PRE6	P40303	254 aa	Known RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	GVP36	P40531	326 aa	Known RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	CPR7	P47103	393 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	CUS2	P53830	285 aa	Predicted RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	SWT21	P53873	357 aa	Predicted RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	AAH1	P53909	347 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	SPG4	Q04438	115 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	YPR147C	Q06522	304 aa	Known RBP	3.16	□□□□□ -1.9
TDA3	YHR009C	DAS2	Q12084	232 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	BBP1	Q12365	385 aa		3.16	□□□□□ -1.9
TDA3	YHR009C	AUS1	Q08409	1394 aa		3.15	□□□□□ -1.9
TDA3	YHR009C	IPP1	P00817	287 aa	Known RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	GCN3	P14741	305 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	YPK2	P18961	677 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	YHR127W	P38833	243 aa	Known RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	FRT2	P39734	528 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	EDC3	P39998	551 aa	Known RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	YRB2	P40517	327 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	MIC26	P50087	233 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	CWC23	P52868	283 aa	Predicted RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	UFD1	P53044	361 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	CDC123	Q05791	360 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	PIN3	Q06449	215 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	YLR126C	Q12288	251 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	ATG5	Q12380	294 aa		3.15	□□□□□ -1.91
TDA3	YHR009C	SPT6	P23615	1451 aa	Known RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	RPA190	P10964	1664 aa	Known RBP	3.15	□□□□□ -1.91
TDA3	YHR009C	DPB2	P24482	689 aa	Predicted RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	GDH2	P33327	1092 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	CSG2	P35206	410 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	YBL081W	P38180	368 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	ARN2	P38724	620 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	YHL044W	P38727	235 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	BDH1	P39714	382 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	RFC4	P40339	323 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	LSM1	P47017	172 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	YMR114C	Q04471	368 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	YMR226C	Q05016	267 aa	Known RBP	3.14	□□□□□ -1.91
TDA3	YHR009C	SEI1	Q06058	285 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	HIR3	P47171	1648 aa		3.14	□□□□□ -1.91
TDA3	YHR009C	YDR157W	A0A023PZE8	133 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	RPS19A	P07280	144 aa	Known RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	RPS19B	P07281	144 aa	Predicted RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	MATALPHA2	P0CY08	210 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	HMLALPHA2	P0CY09	210 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	BUD23	P25627	275 aa	Predicted RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	TAF14	P35189	244 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	DRE2	P36152	348 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	SEO1	P39709	593 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	YFH7	P43591	353 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	COQ5	P49017	307 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	TRM9	P49957	279 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	MRH4	P53166	561 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	OSH6	Q02201	448 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	UIP4	Q08926	304 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	YDL211C	Q12121	372 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	YRA1	Q12159	226 aa	Known RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	RTR2	Q12378	196 aa		3.13	□□□□□ -1.91
TDA3	YHR009C	ADE6	P38972	1358 aa	Known RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	ROM2	P51862	1356 aa	Known RBP	3.13	□□□□□ -1.91
TDA3	YHR009C	BCY1	P07278	416 aa	Known RBP	3.12	□□□□□ -1.91
TDA3	YHR009C	YOX1	P34161	385 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	GIM4	P40005	111 aa	Known RBP	3.12	□□□□□ -1.91
TDA3	YHR009C	RPE1	P46969	238 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	YPL039W	Q03080	316 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	RRP40	Q08285	240 aa	Known RBP	3.12	□□□□□ -1.91
TDA3	YHR009C	CDC25	P04821	1589 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	SSK2	P53599	1579 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	SPT3	P06844	337 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	SNA3	P14359	133 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	MRPL39	P36533	70 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	AIM2	P39721	246 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	YFL012W	P43580	148 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	TMA22	P47089	198 aa	Predicted RBP	3.12	□□□□□ -1.91
TDA3	YHR009C	YJR149W	P47177	404 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	MGA1	P53050	456 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	ALG13	P53178	202 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	YGL034C	P53186	121 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	SMD1	Q02260	146 aa	Predicted RBP	3.12	□□□□□ -1.91
TDA3	YHR009C	YOR186W	Q08560	144 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	DCN1	Q12395	269 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	YCL001W-B	Q96VH2	84 aa		3.12	□□□□□ -1.91
TDA3	YHR009C	IQG1	Q12280	1495 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	YGL041W-A	P0C5N3	154 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	CBF1	P17106	351 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	CPT1	P17898	393 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms