RNA–Protein interactions for RNA: YGR041W

BUD9, Transcript of Protein involved in bud-site selection, yeast

Gene BUD9, Length 1,644 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD9	YGR041W	YET2	Q04210	160 aa		5.45	□□□□□ -1.54
BUD9	YGR041W	FAR10	Q06001	478 aa		5.45	□□□□□ -1.54
BUD9	YGR041W	YNG1	Q08465	219 aa		5.45	□□□□□ -1.54
BUD9	YGR041W	THP3	Q12049	470 aa	Known RBP	5.45	□□□□□ -1.54
BUD9	YGR041W	MCT1	Q12283	360 aa		5.45	□□□□□ -1.54
BUD9	YGR041W	PUT1	P09368	476 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	MRPL20	P22354	195 aa	Predicted RBP	5.44	□□□□□ -1.54
BUD9	YGR041W	PPH21	P23594	369 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	PHO89	P38361	574 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	RCK1	P38622	512 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	GOS1	P38736	223 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	HAC1	P41546	238 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	FMP32	P43557	207 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	LSM1	P47017	172 aa	Known RBP	5.44	□□□□□ -1.54
BUD9	YGR041W	TMA20	P89886	181 aa	Predicted RBP	5.44	□□□□□ -1.54
BUD9	YGR041W	PRP38	Q00723	242 aa	Predicted RBP	5.44	□□□□□ -1.54
BUD9	YGR041W	SPC2	Q04969	178 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	MMT2	Q08970	484 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	RFM1	Q12192	310 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	EMP46	Q12396	444 aa		5.44	□□□□□ -1.54
BUD9	YGR041W	RPS14A	P06367	137 aa	Known RBP	5.43	□□□□□ -1.54
BUD9	YGR041W	RNA14	P25298	677 aa	Known RBP	5.43	□□□□□ -1.54
BUD9	YGR041W	URA10	P30402	227 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	PMT2	P31382	759 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	SGE1	P33335	543 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	POP7	P38291	140 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
BUD9	YGR041W	YHR127W	P38833	243 aa	Known RBP	5.43	□□□□□ -1.54
BUD9	YGR041W	RPS14B	P39516	138 aa	Known RBP	5.43	□□□□□ -1.54
BUD9	YGR041W	YJL016W	P47072	561 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	BRR6	P53062	197 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	YKR005C	Q02203	525 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	SNO1	Q03144	224 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	SCS7	Q03529	384 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	GAS2	Q06135	555 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	COQ10	Q08058	207 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	IES3	Q12345	250 aa		5.43	□□□□□ -1.54
BUD9	YGR041W	ASP3-2	P0CX77	362 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	ASP3-3	P0CX78	362 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	ASP3-4	P0CX79	362 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	ASP3-1	P0CZ17	362 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	ZWF1	P11412	505 aa	Known RBP	5.42	□□□□□ -1.54
BUD9	YGR041W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
BUD9	YGR041W	MRPL3	P36516	390 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	MRP21	P38175	177 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	CHL4	P38907	458 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	HEM14	P40012	539 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	YFL012W	P43580	148 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	NCA3	P46955	337 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	MCM22	P47167	239 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	RBL2	P48606	106 aa	Known RBP	5.42	□□□□□ -1.54
BUD9	YGR041W	NRM1	P53718	249 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	ELP3	Q02908	557 aa	Known RBP	5.42	□□□□□ -1.54
BUD9	YGR041W	YPL245W	Q12179	454 aa	Known RBP	5.42	□□□□□ -1.54
BUD9	YGR041W	UBR2	Q07963	1872 aa		5.42	□□□□□ -1.54
BUD9	YGR041W	CYC3	P06182	269 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	SPS18	P32572	300 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	YOX1	P34161	385 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	SEO1	P39709	593 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	PAN6	P40459	309 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	OST3	P48439	350 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	AYT1	Q12226	474 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	TPO4	Q12256	659 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	UTP11	P34247	250 aa	Predicted RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	SRP102	P36057	244 aa	Predicted RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	DBP7	P36120	742 aa	Known RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	ARC40	P38328	384 aa	Known RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	COG3	P40094	801 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	STB1	P42845	420 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	COG7	P53195	279 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	SHY1	P53266	389 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	GTR2	P53290	341 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	TPS1	Q00764	495 aa	Known RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	FMP42	Q04991	504 aa		5.41	□□□□□ -1.54
BUD9	YGR041W	RPN8	Q08723	338 aa	Known RBP	5.41	□□□□□ -1.54
BUD9	YGR041W	TRP1	P00912	224 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	MRS3	P10566	314 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	PHO80	P20052	293 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	LSM12	P38828	187 aa	Known RBP	5.4	□□□□□ -1.55
BUD9	YGR041W	AIM18	P38884	321 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	HPM1	P40481	377 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	MDV1	P47025	714 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	TPC1	P53257	314 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	SPG4	Q04438	115 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	DYN3	Q04949	312 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	FSH2	Q05015	223 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	ERP1	Q05359	219 aa	Known RBP	5.4	□□□□□ -1.55
BUD9	YGR041W	ATP16	Q12165	160 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	YOR342C	Q12182	319 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	YMR030W-A	Q3E760	96 aa		5.4	□□□□□ -1.55
BUD9	YGR041W	YKR104W	P0CE69	306 aa		5.39	□□□□□ -1.55
BUD9	YGR041W	RPL4A	P10664	362 aa	Known RBP	5.39	□□□□□ -1.55
BUD9	YGR041W	SNF4	P12904	322 aa		5.39	□□□□□ -1.55
BUD9	YGR041W	CPR1	P14832	162 aa	Known RBP	5.39	□□□□□ -1.55
BUD9	YGR041W	NUF2	P33895	451 aa		5.39	□□□□□ -1.55
BUD9	YGR041W	YBR285W	P38354	144 aa		5.39	□□□□□ -1.55
BUD9	YGR041W	RPL4B	P49626	362 aa	Known RBP	5.39	□□□□□ -1.55
BUD9	YGR041W	PDR17	P53844	350 aa		5.39	□□□□□ -1.55
BUD9	YGR041W	YHC1	Q05900	231 aa	Known RBP	5.39	□□□□□ -1.55
BUD9	YGR041W	SEI1	Q06058	285 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 61 ms