RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	TCD2	P36101	447 aa	Known RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	MRPL11	P36521	249 aa	Predicted RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	BNA4	P38169	460 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	ZTA1	P38230	334 aa	Known RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	CUE1	P38428	203 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	URA8	P38627	578 aa	Predicted RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	BDH1	P39714	382 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	SMB1	P40018	196 aa	Known RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	OSW5	P40219	148 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	YIL089W	P40500	205 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	IME4	P41833	600 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	YFL040W	P43562	540 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	MOB2	P43563	287 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	GPI14	P47088	403 aa	Known RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	AIM25	P47140	327 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	TAM41	P53230	385 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	YGR117C	P53270	476 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	FRE4	P53746	719 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	BOR1	P53838	576 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	LSM3	P57743	89 aa	Known RBP	3.05	□□□□□ -1.92
ECO1	YFR027W	TIM8	P57744	87 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	RSM23	Q01163	450 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	TEN1	Q07921	160 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	BSC6	Q08280	497 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	SIA1	Q12212	622 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	PST1	Q12355	444 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	HUT1	Q12520	339 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	YMR030W-A	Q3E760	96 aa		3.05	□□□□□ -1.92
ECO1	YFR027W	YEL009C-A	A0A023PZF2	135 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	COX1	P00401	534 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SIR2	P06700	562 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	PHO2	P07269	559 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	UBI4	P0CG63	381 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RPL40A	P0CH08	128 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RPL40B	P0CH09	128 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RPL35A	P0CX84	120 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RPL35B	P0CX85	120 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	PPH21	P23594	369 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	BUD5	P25300	642 aa	Predicted RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	SLM5	P25345	492 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RER1	P25560	188 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MRP17	P28778	131 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MRP20	P32387	263 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MDL1	P33310	695 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MSN2	P33748	704 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
ECO1	YFR027W	PRY2	P36110	329 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	TRS20	P38334	175 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	NDT80	P38830	627 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	WSS1	P38838	269 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	YHR177W	P38867	453 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	LYS12	P40495	371 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	FIS1	P40515	155 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	EMC5	P40540	141 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	CDC1	P40986	491 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SMK1	P41808	388 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SPG5	P42933	373 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MSY1	P48527	492 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MPP6	P53725	186 aa	Predicted RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	ASI3	P53983	676 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	TPS1	Q00764	495 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RCE1	Q03530	315 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	GAS3	Q03655	524 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	MSS11	Q03825	758 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	YMR087W	Q04299	284 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SDH7	Q04401	133 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	NOC4	Q06512	552 aa	Predicted RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	PRP11	Q07350	266 aa	Predicted RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	FSF1	Q12029	327 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	RRG1	Q12167	365 aa	Predicted RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	YLL056C	Q12177	298 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	FRE8	Q12209	686 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	YDR262W	Q12331	272 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	PDH1	Q12428	516 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	AIM45	Q12480	344 aa	Known RBP	3.04	□□□□□ -1.92
ECO1	YFR027W	BI3	Q9ZZW7	517 aa		3.04	□□□□□ -1.92
ECO1	YFR027W	SAL1	D6W196	494 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	TDH2	P00358	332 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
ECO1	YFR027W	HIS1	P00498	297 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	PAI3	P01094	68 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	RPL27A	P0C2H6	136 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	RPL27B	P0C2H7	136 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	TY2A-LR1	P0C2J4	438 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	BGL2	P15703	313 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	ATP10	P18496	279 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	SEC22	P22214	214 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	RBK1	P25332	333 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	TY2A-C	P25383	438 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	LRE1	P25579	583 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	YCR090C	P25654	182 aa	Known RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	POP5	P28005	173 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	UTR5	P32630	166 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	FMT1	P32785	401 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	COX13	P32799	129 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	UPS2	P35200	230 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	MCH2	P36032	473 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	MRPL24	P36525	258 aa	Predicted RBP	3.03	□□□□□ -1.92
ECO1	YFR027W	AGP2	P38090	596 aa		3.03	□□□□□ -1.92
ECO1	YFR027W	NTC20	P38302	140 aa	Predicted RBP	3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms