RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W YPR172WQ06608 200 aa3.67□□□□□ -1.82
TPA1YER049W SCP1Q08873 200 aa3.67□□□□□ -1.82
TPA1YER049W LEU9Q12166 604 aaKnown RBP3.67□□□□□ -1.82
TPA1YER049W PRS5Q12265 496 aaKnown RBP3.67□□□□□ -1.82
TPA1YER049W NUP1P20676 1076 aa3.66□□□□□ -1.82
TPA1YER049W SNC2P33328 115 aa3.66□□□□□ -1.82
TPA1YER049W PAD1P33751 242 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TPA1YER049W FMP46P36141 133 aaKnown RBP3.66□□□□□ -1.82
TPA1YER049W AVT5P38176 459 aa3.66□□□□□ -1.82
TPA1YER049W PRP39P39682 629 aaKnown RBP3.66□□□□□ -1.82
TPA1YER049W SPC25P40014 221 aa3.66□□□□□ -1.82
TPA1YER049W MOB1P40484 314 aa3.66□□□□□ -1.82
TPA1YER049W YIR035CP40579 254 aa3.66□□□□□ -1.82
TPA1YER049W DAN1P47178 298 aa3.66□□□□□ -1.82
TPA1YER049W BXI1P48558 297 aa3.66□□□□□ -1.82
TPA1YER049W TIM21P53220 239 aa3.66□□□□□ -1.82
TPA1YER049W FIT1Q04433 528 aa3.66□□□□□ -1.82
TPA1YER049W YMR253CQ04835 414 aa3.66□□□□□ -1.82
TPA1YER049W COX19Q3E731 98 aa3.66□□□□□ -1.82
TPA1YER049W CDC7P06243 507 aa3.66□□□□□ -1.82
TPA1YER049W SPT10P35208 640 aa3.66□□□□□ -1.82
TPA1YER049W SDH4P37298 181 aa3.66□□□□□ -1.82
TPA1YER049W POP8P38208 133 aa3.66□□□□□ -1.82
TPA1YER049W PIG2P40187 538 aa3.66□□□□□ -1.82
TPA1YER049W ADO1P47143 340 aaKnown RBP3.66□□□□□ -1.82
TPA1YER049W UBP8P50102 471 aa3.66□□□□□ -1.82
TPA1YER049W YGR066CP53242 292 aa3.66□□□□□ -1.82
TPA1YER049W GPI15P53961 229 aa3.66□□□□□ -1.82
TPA1YER049W ARL3Q02804 198 aa3.66□□□□□ -1.82
TPA1YER049W PEX25Q02969 394 aa3.66□□□□□ -1.82
TPA1YER049W HNT1Q04344 158 aaKnown RBP3.66□□□□□ -1.82
TPA1YER049W MRX8Q05473 314 aa3.66□□□□□ -1.82
TPA1YER049W RRT7Q07829 113 aa3.66□□□□□ -1.82
TPA1YER049W COQ10Q08058 207 aa3.66□□□□□ -1.82
TPA1YER049W HRT1Q08273 121 aa3.66□□□□□ -1.82
TPA1YER049W SRO7Q12038 1033 aa3.66□□□□□ -1.82
TPA1YER049W MCT1Q12283 360 aa3.66□□□□□ -1.82
TPA1YER049W NAG1Q8TGN9 163 aa3.66□□□□□ -1.82
TPA1YER049W OPI3P05375 206 aa3.65□□□□□ -1.83
TPA1YER049W RPL20AP0CX23 172 aaKnown RBP3.65□□□□□ -1.83
TPA1YER049W RPL20BP0CX24 172 aaPredicted RBP3.65□□□□□ -1.83
TPA1YER049W GLK1P17709 500 aaKnown RBP3.65□□□□□ -1.83
TPA1YER049W MNL1P38888 796 aa3.65□□□□□ -1.83
TPA1YER049W YAL037WP39728 267 aa3.65□□□□□ -1.83
TPA1YER049W DLS1P40366 167 aa3.65□□□□□ -1.83
TPA1YER049W YIL067CP40514 678 aa3.65□□□□□ -1.83
TPA1YER049W VMA21P41806 77 aa3.65□□□□□ -1.83
TPA1YER049W GNA1P43577 159 aaPredicted RBP3.65□□□□□ -1.83
TPA1YER049W APM1Q00776 475 aaPredicted RBP3.65□□□□□ -1.83
TPA1YER049W NCE101Q02820 53 aa3.65□□□□□ -1.83
TPA1YER049W RVB1Q03940 463 aaKnown RBP3.65□□□□□ -1.83
TPA1YER049W RDR1Q08904 546 aa3.65□□□□□ -1.83
TPA1YER049W FCF2Q12035 217 aaPredicted RBP3.65□□□□□ -1.83
TPA1YER049W AIM45Q12480 344 aaKnown RBP3.65□□□□□ -1.83
TPA1YER049W SPT15P13393 240 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W RPB3P16370 318 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W ADH7P25377 361 aa3.64□□□□□ -1.83
TPA1YER049W SLC1P33333 303 aa3.64□□□□□ -1.83
TPA1YER049W VPS51P36116 164 aa3.64□□□□□ -1.83
TPA1YER049W RPL13BP40212 199 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W LRO1P40345 661 aa3.64□□□□□ -1.83
TPA1YER049W PAU15P40585 124 aa3.64□□□□□ -1.83
TPA1YER049W HXT14P42833 540 aa3.64□□□□□ -1.83
TPA1YER049W ZIM17P42844 174 aa3.64□□□□□ -1.83
TPA1YER049W YJR056CP47115 236 aa3.64□□□□□ -1.83
TPA1YER049W OCA1P50946 238 aaPredicted RBP3.64□□□□□ -1.83
TPA1YER049W YPL108WQ02872 168 aaPredicted RBP3.64□□□□□ -1.83
TPA1YER049W TRI1Q05024 226 aa3.64□□□□□ -1.83
TPA1YER049W RTT103Q05543 409 aa3.64□□□□□ -1.83
TPA1YER049W NNT1Q05874 261 aa3.64□□□□□ -1.83
TPA1YER049W YDL086WQ07505 273 aa3.64□□□□□ -1.83
TPA1YER049W BSC6Q08280 497 aa3.64□□□□□ -1.83
TPA1YER049W MCP1Q12106 302 aa3.64□□□□□ -1.83
TPA1YER049W RLM1Q12224 676 aa3.64□□□□□ -1.83
TPA1YER049W YLR118CQ12354 227 aa3.64□□□□□ -1.83
TPA1YER049W RPL13AQ12690 199 aaPredicted RBP3.64□□□□□ -1.83
TPA1YER049W YLR146W-AQ2V2P1 62 aa3.64□□□□□ -1.83
TPA1YER049W ADH3P07246 375 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W QCR2P07257 368 aa3.64□□□□□ -1.83
TPA1YER049W CTA1P15202 515 aa3.64□□□□□ -1.83
TPA1YER049W ARO4P32449 370 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W NRP1P32770 719 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
TPA1YER049W SRP102P36057 244 aaPredicted RBP3.64□□□□□ -1.83
TPA1YER049W SSH1P38353 490 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W YPT31P38555 223 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W MED6P38782 295 aa3.64□□□□□ -1.83
TPA1YER049W YEA6P39953 335 aa3.64□□□□□ -1.83
TPA1YER049W SLZ1P40167 298 aa3.64□□□□□ -1.83
TPA1YER049W RFC2P40348 353 aa3.64□□□□□ -1.83
TPA1YER049W NAS2P40555 220 aa3.64□□□□□ -1.83
TPA1YER049W UFD1P53044 361 aa3.64□□□□□ -1.83
TPA1YER049W RMD9P53140 646 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W MEH1Q02205 184 aa3.64□□□□□ -1.83
TPA1YER049W MRPS17Q03246 237 aaPredicted RBP3.64□□□□□ -1.83
TPA1YER049W TMA23Q03525 211 aa3.64□□□□□ -1.83
TPA1YER049W YML018CQ03730 393 aa3.64□□□□□ -1.83
TPA1YER049W YDR248CQ03786 193 aa3.64□□□□□ -1.83
TPA1YER049W CAB5Q03941 241 aa3.64□□□□□ -1.83
TPA1YER049W ERP1Q05359 219 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W RAD28Q12021 506 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms