RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	ACB1	P31787	87 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	MRPL6	P32904	214 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	SDH3	P33421	198 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	SHG1	P38337	142 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	SSH1	P38353	490 aa	Known RBP	5.06	□□□□□ -1.6
TRP1	YDR007W	POG1	P40473	351 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	GLR1	P41921	483 aa	Known RBP	5.06	□□□□□ -1.6
TRP1	YDR007W	MTM1	P53320	366 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	OST6	Q03723	332 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	RRP40	Q08285	240 aa	Known RBP	5.06	□□□□□ -1.6
TRP1	YDR007W	CSM4	Q08955	156 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	SLF1	Q12034	447 aa	Known RBP	5.06	□□□□□ -1.6
TRP1	YDR007W	YPL119C-A	Q3E751	87 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	COA6	Q3E846	104 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	YCL021W-A	Q96VH3	125 aa		5.06	□□□□□ -1.6
TRP1	YDR007W	URA6	P15700	204 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	BUB2	P26448	306 aa	Predicted RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	ARO7	P32178	256 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	GSP1	P32835	219 aa	Known RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	GSP2	P32836	220 aa	Known RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	YKL162C	P36052	402 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	IML3	P38265	245 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	RFC2	P40348	353 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YIL067C	P40514	678 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	RPL10	P41805	221 aa	Known RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	GLC8	P41818	229 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	NSE4	P43124	402 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	LCB3	P47013	409 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	LOH1	P47055	219 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	JHD2	P47156	728 aa	Predicted RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	NSA1	P53136	463 aa	Predicted RBP	5.05	□□□□□ -1.6
TRP1	YDR007W	LSB1	P53281	241 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	MTQ1	P53944	314 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YMR317W	Q04893	1140 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YDR222W	Q04925	415 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YOL019W	Q08157	551 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YLR126C	Q12288	251 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	AGC1	Q12482	902 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	YGL194C-A	Q2V2P6	80 aa		5.05	□□□□□ -1.6
TRP1	YDR007W	ATP5	P09457	212 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
TRP1	YDR007W	SNF6	P18888	332 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	PRE1	P22141	198 aa	Known RBP	5.04	□□□□□ -1.6
TRP1	YDR007W	DAL2	P25335	343 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	YUR1	P26725	428 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	RAD23	P32628	398 aa	Known RBP	5.04	□□□□□ -1.6
TRP1	YDR007W	YPT53	P36019	220 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	POP8	P38208	133 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	RCK1	P38622	512 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	PRM9	P39551	298 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	VAB2	P40003	282 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	KEG1	P43614	200 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	NBP35	P52920	328 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	YGL101W	P53144	215 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	YMR209C	Q03648	457 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	CDC123	Q05791	360 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	FRQ1	Q06389	190 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	GPI11	Q06636	219 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	ICT1	Q12385	394 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	GIS3	Q12418	502 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	PCL9	Q12477	304 aa		5.04	□□□□□ -1.6
TRP1	YDR007W	ARG80	P07249	177 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	NAM2	P11325	894 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	REV1	P12689	985 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	FUN14	P18411	198 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	SEC59	P20048	519 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	AHC2	P25649	128 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	MKK1	P32490	508 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	TMT1	P32643	299 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	SOL2	P37262	315 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	HMT1	P38074	348 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	FET3	P38993	636 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	HAC1	P41546	238 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	MCM22	P47167	239 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	MKC7	P53379	596 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	YDC1	Q02896	317 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	SCP1	Q08873	200 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	YOR387C	Q08910	206 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	RRP42	Q12277	265 aa	Predicted RBP	5.03	□□□□□ -1.6
TRP1	YDR007W	YER078W-A	Q3E7A2	54 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	VMA9	Q3E7B6	73 aa		5.03	□□□□□ -1.6
TRP1	YDR007W	URA10	P30402	227 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	TCA17	P32613	152 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	MGM101	P32787	269 aa	Known RBP	5.02	□□□□□ -1.61
TRP1	YDR007W	YKL070W	P36087	169 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	SPL2	P38839	148 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	FMC1	P40491	155 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	CDC40	P40968	455 aa	Predicted RBP	5.02	□□□□□ -1.61
TRP1	YDR007W	YAE1	P47118	141 aa	Predicted RBP	5.02	□□□□□ -1.61
TRP1	YDR007W	SAE3	P89114	91 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	YPR127W	Q06494	345 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	RFU1	Q08003	200 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	YOL131W	Q08270	108 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	NDD1	Q08887	554 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	FDH1	Q08911	376 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.02	□□□□□ -1.61
TRP1	YDR007W	Q0144	Q9ZZW2	109 aa		5.02	□□□□□ -1.61
TRP1	YDR007W	CKS1	P20486	150 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	MIR1	P23641	311 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	TAH1	P25638	111 aa	Predicted RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms