RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	TY2A-DR3	Q99303	438 aa		5.24	□□□□□ -1.57
SUB2	YDL084W	COX3	P00420	269 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	HIS1	P00498	297 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	COX4	P04037	155 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	PBI2	P0CT04	75 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	BPT1	P14772	1559 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	EXO70	P19658	623 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	PPH21	P23594	369 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	RIM1	P32445	135 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	FMT1	P32785	401 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YET1	P35723	206 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	EMC3	P36039	253 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YAL037W	P39728	267 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YIR016W	P40572	265 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YPS6	P40583	537 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YFL040W	P43562	540 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YJR015W	P47090	510 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	JJJ3	P47138	172 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	BUL1	P48524	976 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	CTR1	P49573	406 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	ASI3	P53983	676 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	AIM11	P87275	137 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	NRG1	Q03125	231 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YMR099C	Q03161	297 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	LIP2	Q06005	328 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YPR114W	Q06107	315 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	CRD1	Q07560	283 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	AFT2	Q08957	416 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YPR202W	Q08993	238 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	SIA1	Q12212	622 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	PST1	Q12355	444 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	DET1	Q99288	334 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	YIL177C	P40434	1758 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YJL225C	P40889	1758 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YER039C-A	P0CD97	72 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YLL053C	P0CD98	152 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YKR104W	P0CE69	306 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	BAR1	P12630	587 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	PHO85	P17157	305 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	BCS1	P32839	456 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YBR090C	P38253	122 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	SLM6	P38343	150 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	CUE1	P38428	203 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	DBP8	P38719	431 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	YMR144W	P40214	342 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	MRPL49	P40858	161 aa	Predicted RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	HXT16	P47185	567 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	MSO1	P53604	210 aa	Known RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	CSL4	P53859	292 aa	Predicted RBP	5.23	□□□□□ -1.57
SUB2	YDL084W	YOL073C	Q08232	322 aa		5.23	□□□□□ -1.57
SUB2	YDL084W	STE7	P06784	515 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	BGL2	P15703	313 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	HYP2	P23301	157 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	VMA3	P25515	160 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	TAH1	P25638	111 aa	Predicted RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	SNC1	P31109	117 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	NUP2	P32499	720 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	PDC2	P32896	925 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	KTI12	P34253	313 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	TFA2	P36145	328 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	YBR053C	P38235	358 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	YBR096W	P38256	230 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	EHT1	P38295	451 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	YGP1	P38616	354 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	RPL14B	P38754	138 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	YEL075C	P39972	122 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	RPL13B	P40212	199 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	BUD9	P53226	547 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	MTM1	P53320	366 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	YNR014W	P53719	212 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	RSC9	Q03124	581 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	CUE4	Q04201	117 aa	Predicted RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	SEC13	Q04491	297 aa	Known RBP	5.22	□□□□□ -1.57
SUB2	YDL084W	INM2	Q05533	292 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	COQ11	Q05892	277 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	CTR3	Q06686	241 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	PEX27	Q08580	376 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	YLR118C	Q12354	227 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	PEX11	Q12462	236 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	PCC1	Q3E833	88 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	ISD11	Q6Q560	94 aa		5.22	□□□□□ -1.57
SUB2	YDL084W	SNQ2	P32568	1501 aa	Known RBP	5.21	□□□□□ -1.57
SUB2	YDL084W	TY3B-G	Q99315	1547 aa		5.21	□□□□□ -1.57
SUB2	YDL084W	TPK3	P05986	398 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	ADK1	P07170	222 aa	Known RBP	5.21	□□□□□ -1.58
SUB2	YDL084W	CDC6	P09119	513 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	UBI4	P0CG63	381 aa	Known RBP	5.21	□□□□□ -1.58
SUB2	YDL084W	TRX3	P25372	127 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	YIH1	P25637	258 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	LAG1	P38703	411 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	CHS7	P38843	316 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	YIL152W	P40455	235 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	VEL1	P53058	206 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	MTL1	P53214	551 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	YMR178W	Q03219	274 aa	Known RBP	5.21	□□□□□ -1.58
SUB2	YDL084W	YDR209C	Q03480	137 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	YMR320W	Q04897	101 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	TDA6	Q06466	467 aa		5.21	□□□□□ -1.58
SUB2	YDL084W	TAZ1	Q06510	381 aa		5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms