RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
RER1YCL001W NUP116Q02630 1113 aa3.73□□□□□ -1.81
RER1YCL001W HOT1Q03213 719 aa3.73□□□□□ -1.81
RER1YCL001W BNA7Q04066 261 aa3.73□□□□□ -1.81
RER1YCL001W YDR387CQ04162 555 aa3.73□□□□□ -1.81
RER1YCL001W SMP3Q04174 516 aa3.73□□□□□ -1.81
RER1YCL001W RNH1Q04740 348 aa3.73□□□□□ -1.81
RER1YCL001W LOT6Q07923 191 aa3.73□□□□□ -1.81
RER1YCL001W YOR097CQ12274 175 aaPredicted RBP3.73□□□□□ -1.81
RER1YCL001W IZH2Q12442 317 aa3.73□□□□□ -1.81
RER1YCL001W UTP20P35194 2493 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W SCEIP03882 235 aa3.72□□□□□ -1.81
RER1YCL001W RPS16AP0CX51 143 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W RPS16BP0CX52 143 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W RNA14P25298 677 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W VPH2P32341 215 aa3.72□□□□□ -1.81
RER1YCL001W RSM22P36056 628 aa3.72□□□□□ -1.81
RER1YCL001W YBR220CP38318 560 aa3.72□□□□□ -1.81
RER1YCL001W GAT2P40209 560 aa3.72□□□□□ -1.81
RER1YCL001W YRB2P40517 327 aa3.72□□□□□ -1.81
RER1YCL001W GWT1P47026 490 aa3.72□□□□□ -1.81
RER1YCL001W VMA10P48836 114 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W YIP5P53108 310 aa3.72□□□□□ -1.81
RER1YCL001W NQM1P53228 333 aaPredicted RBP3.72□□□□□ -1.81
RER1YCL001W MAL12P53341 584 aa3.72□□□□□ -1.81
RER1YCL001W PGA1P53896 198 aa3.72□□□□□ -1.81
RER1YCL001W YMR099CQ03161 297 aaKnown RBP3.72□□□□□ -1.81
RER1YCL001W YDR102CQ03864 110 aa3.72□□□□□ -1.81
RER1YCL001W YDR391CQ04170 232 aa3.72□□□□□ -1.81
RER1YCL001W CTS2Q06350 511 aa3.72□□□□□ -1.81
RER1YCL001W YDL114WQ07530 308 aa3.72□□□□□ -1.81
RER1YCL001W MSW1P04803 379 aa3.71□□□□□ -1.82
RER1YCL001W REC114P32841 428 aa3.71□□□□□ -1.82
RER1YCL001W YME2P32843 850 aa3.71□□□□□ -1.82
RER1YCL001W SUR1P33300 382 aa3.71□□□□□ -1.82
RER1YCL001W YKL187CP34231 750 aa3.71□□□□□ -1.82
RER1YCL001W SRP102P36057 244 aaPredicted RBP3.71□□□□□ -1.82
RER1YCL001W YBR285WP38354 144 aa3.71□□□□□ -1.82
RER1YCL001W SOP4P39543 234 aaPredicted RBP3.71□□□□□ -1.82
RER1YCL001W GDS1P41913 522 aa3.71□□□□□ -1.82
RER1YCL001W PFS2P42841 465 aaKnown RBP3.71□□□□□ -1.82
RER1YCL001W MTM1P53320 366 aa3.71□□□□□ -1.82
RER1YCL001W MNT4P53745 580 aa3.71□□□□□ -1.82
RER1YCL001W MRP51Q02950 344 aa3.71□□□□□ -1.82
RER1YCL001W YMD8Q03697 442 aa3.71□□□□□ -1.82
RER1YCL001W AIM36Q03798 255 aa3.71□□□□□ -1.82
RER1YCL001W YLR345WQ06137 509 aa3.71□□□□□ -1.82
RER1YCL001W RRP9Q06506 573 aaKnown RBP3.71□□□□□ -1.82
RER1YCL001W TAZ1Q06510 381 aa3.71□□□□□ -1.82
RER1YCL001W IPK1Q06667 281 aa3.71□□□□□ -1.82
RER1YCL001W FIT3Q08907 204 aa3.71□□□□□ -1.82
RER1YCL001W Q0297Q9ZZV8 51 aa3.71□□□□□ -1.82
RER1YCL001W NFT1P0CE68 1218 aa3.7□□□□□ -1.82
RER1YCL001W RPL35AP0CX84 120 aaKnown RBP3.7□□□□□ -1.82
RER1YCL001W RPL35BP0CX85 120 aaKnown RBP3.7□□□□□ -1.82
RER1YCL001W PRP21P32524 280 aaPredicted RBP3.7□□□□□ -1.82
RER1YCL001W ECT1P33412 323 aa3.7□□□□□ -1.82
RER1YCL001W CLG1P35190 452 aa3.7□□□□□ -1.82
RER1YCL001W YBR063CP38083 404 aa3.7□□□□□ -1.82
RER1YCL001W SFH5P47008 294 aa3.7□□□□□ -1.82
RER1YCL001W NUP49Q02199 472 aa3.7□□□□□ -1.82
RER1YCL001W SYC1Q08553 188 aaPredicted RBP3.7□□□□□ -1.82
RER1YCL001W THP3Q12049 470 aaKnown RBP3.7□□□□□ -1.82
RER1YCL001W PST2Q12335 198 aaKnown RBP3.7□□□□□ -1.82
RER1YCL001W PCL9Q12477 304 aa3.7□□□□□ -1.82
RER1YCL001W SPO24Q3E752 67 aa3.7□□□□□ -1.82
RER1YCL001W CDC39P25655 2108 aaKnown RBP3.7□□□□□ -1.82
RER1YCL001W PDE2P06776 526 aa3.69□□□□□ -1.82
RER1YCL001W DBF2P22204 572 aa3.69□□□□□ -1.82
RER1YCL001W DAL80P26343 269 aa3.69□□□□□ -1.82
RER1YCL001W CLB6P32943 380 aa3.69□□□□□ -1.82
RER1YCL001W SPT10P35208 640 aa3.69□□□□□ -1.82
RER1YCL001W NTC20P38302 140 aaPredicted RBP3.69□□□□□ -1.82
RER1YCL001W IPT1P38954 527 aa3.69□□□□□ -1.82
RER1YCL001W HHT1P61830 136 aa3.69□□□□□ -1.82
RER1YCL001W SKO1Q02100 647 aa3.69□□□□□ -1.82
RER1YCL001W YMR315WQ04869 349 aaKnown RBP3.69□□□□□ -1.82
RER1YCL001W NNT1Q05874 261 aa3.69□□□□□ -1.82
RER1YCL001W GAT3Q07928 141 aa3.69□□□□□ -1.82
RER1YCL001W MED2Q12124 431 aa3.69□□□□□ -1.82
RER1YCL001W MCT1Q12283 360 aa3.69□□□□□ -1.82
RER1YCL001W ISN1Q99312 450 aa3.69□□□□□ -1.82
RER1YCL001W RPS23AP0CX29 145 aaKnown RBP3.68□□□□□ -1.82
RER1YCL001W RPS23BP0CX30 145 aa3.68□□□□□ -1.82
RER1YCL001W IDP1P21954 428 aaKnown RBP3.68□□□□□ -1.82
RER1YCL001W MEK1P24719 497 aaPredicted RBP3.68□□□□□ -1.82
RER1YCL001W MNS1P32906 549 aa3.68□□□□□ -1.82
RER1YCL001W EGD2P38879 174 aaKnown RBP3.68□□□□□ -1.82
RER1YCL001W YIL012WP40551 113 aa3.68□□□□□ -1.82
RER1YCL001W LOH1P47055 219 aa3.68□□□□□ -1.82
RER1YCL001W CCC1P47818 322 aa3.68□□□□□ -1.82
RER1YCL001W SBH2P52871 88 aa3.68□□□□□ -1.82
RER1YCL001W YNL046WP53956 172 aa3.68□□□□□ -1.82
RER1YCL001W SNZ1Q03148 297 aa3.68□□□□□ -1.82
RER1YCL001W TLG1Q03322 224 aa3.68□□□□□ -1.82
RER1YCL001W RKM1Q08961 583 aaPredicted RBP3.68□□□□□ -1.82
RER1YCL001W SRL2Q12020 392 aa3.68□□□□□ -1.82
RER1YCL001W TRM10Q12400 293 aa3.68□□□□□ -1.82
RER1YCL001W RPL6BP05739 176 aaKnown RBP3.67□□□□□ -1.82
RER1YCL001W YGL041W-AP0C5N3 154 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 144.9 ms