RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W PMT5P52867 743 aa4.77□□□□□ -1.65
SHP1YBL058W GTF1P53260 183 aaPredicted RBP4.77□□□□□ -1.65
SHP1YBL058W COG5P53951 403 aa4.77□□□□□ -1.65
SHP1YBL058W NGL2Q03264 515 aaKnown RBP4.77□□□□□ -1.65
SHP1YBL058W ECM18Q04623 453 aa4.77□□□□□ -1.65
SHP1YBL058W GRC3Q07845 632 aa4.77□□□□□ -1.65
SHP1YBL058W CYC1P00044 109 aaPredicted RBP4.76□□□□□ -1.65
SHP1YBL058W NDC1P32500 655 aa4.76□□□□□ -1.65
SHP1YBL058W PPZ2P33329 710 aa4.76□□□□□ -1.65
SHP1YBL058W AIM10P39965 576 aaKnown RBP4.76□□□□□ -1.65
SHP1YBL058W YRB2P40517 327 aa4.76□□□□□ -1.65
SHP1YBL058W AVT4P50944 713 aa4.76□□□□□ -1.65
SHP1YBL058W SLD3P53135 668 aa4.76□□□□□ -1.65
SHP1YBL058W GRX5Q02784 150 aa4.76□□□□□ -1.65
SHP1YBL058W VPS71Q03433 280 aa4.76□□□□□ -1.65
SHP1YBL058W YLR345WQ06137 509 aa4.76□□□□□ -1.65
SHP1YBL058W MPD1Q12404 318 aaKnown RBP4.76□□□□□ -1.65
SHP1YBL058W YPL119C-AQ3E751 87 aa4.76□□□□□ -1.65
SHP1YBL058W VCX1Q99385 411 aa4.76□□□□□ -1.65
SHP1YBL058W REP2P03872 296 aa4.75□□□□□ -1.65
SHP1YBL058W GDH1P07262 454 aaKnown RBP4.75□□□□□ -1.65
SHP1YBL058W YGL041W-AP0C5N3 154 aa4.75□□□□□ -1.65
SHP1YBL058W ATP10P18496 279 aa4.75□□□□□ -1.65
SHP1YBL058W RPL5P26321 297 aaKnown RBP4.75□□□□□ -1.65
SHP1YBL058W IMP1P28627 190 aa4.75□□□□□ -1.65
SHP1YBL058W SOR1P35497 357 aaKnown RBP4.75□□□□□ -1.65
SHP1YBL058W NAT2P37293 288 aa4.75□□□□□ -1.65
SHP1YBL058W SHE1P38200 338 aa4.75□□□□□ -1.65
SHP1YBL058W MRH4P53166 561 aa4.75□□□□□ -1.65
SHP1YBL058W YLR152CP54072 576 aa4.75□□□□□ -1.65
SHP1YBL058W YMR099CQ03161 297 aaKnown RBP4.75□□□□□ -1.65
SHP1YBL058W LIP2Q06005 328 aa4.75□□□□□ -1.65
SHP1YBL058W LUC7Q07508 261 aaPredicted RBP4.75□□□□□ -1.65
SHP1YBL058W SOR2Q07786 357 aa4.75□□□□□ -1.65
SHP1YBL058W EAF3Q12432 401 aa4.75□□□□□ -1.65
SHP1YBL058W RPD3P32561 433 aa4.74□□□□□ -1.65
SHP1YBL058W VPS17P32913 551 aa4.74□□□□□ -1.65
SHP1YBL058W MTC2P34246 357 aa4.74□□□□□ -1.65
SHP1YBL058W SDS22P36047 338 aa4.74□□□□□ -1.65
SHP1YBL058W SWD2P36104 329 aaPredicted RBP4.74□□□□□ -1.65
SHP1YBL058W ADH5P38113 351 aaKnown RBP4.74□□□□□ -1.65
SHP1YBL058W ECM31P38122 312 aa4.74□□□□□ -1.65
SHP1YBL058W SSH1P38353 490 aaKnown RBP4.74□□□□□ -1.65
SHP1YBL058W DDI1P40087 428 aa4.74□□□□□ -1.65
SHP1YBL058W RIO2P40160 425 aaKnown RBP4.74□□□□□ -1.65
SHP1YBL058W YFL015CP43578 164 aa4.74□□□□□ -1.65
SHP1YBL058W ERJ5P43613 295 aaPredicted RBP4.74□□□□□ -1.65
SHP1YBL058W FIN1Q03898 291 aa4.74□□□□□ -1.65
SHP1YBL058W LRS4Q04087 347 aaKnown RBP4.74□□□□□ -1.65
SHP1YBL058W YMR087WQ04299 284 aa4.74□□□□□ -1.65
SHP1YBL058W ARP10Q04549 284 aa4.74□□□□□ -1.65
SHP1YBL058W RFM1Q12192 310 aa4.74□□□□□ -1.65
SHP1YBL058W HUT1Q12520 339 aa4.74□□□□□ -1.65
SHP1YBL058W BGL2P15703 313 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W TOM40P23644 387 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W MIG1P27705 504 aa4.73□□□□□ -1.65
SHP1YBL058W PRE4P30657 266 aa4.73□□□□□ -1.65
SHP1YBL058W SLM4P38247 162 aa4.73□□□□□ -1.65
SHP1YBL058W PAM16P42949 149 aa4.73□□□□□ -1.65
SHP1YBL058W FIP1P45976 327 aa4.73□□□□□ -1.65
SHP1YBL058W PUS4P48567 403 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W LYS20P48570 428 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W OKP1P53298 406 aa4.73□□□□□ -1.65
SHP1YBL058W UPS1Q05776 175 aa4.73□□□□□ -1.65
SHP1YBL058W TSR2Q06672 205 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W MRX9Q07349 420 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W HEM25Q07534 307 aa4.73□□□□□ -1.65
SHP1YBL058W LYS21Q12122 440 aaKnown RBP4.73□□□□□ -1.65
SHP1YBL058W FCY1Q12178 158 aa4.73□□□□□ -1.65
SHP1YBL058W CDC28P00546 298 aaKnown RBP4.72□□□□□ -1.65
SHP1YBL058W RPL25P04456 142 aaKnown RBP4.72□□□□□ -1.65
SHP1YBL058W ATR1P13090 542 aa4.72□□□□□ -1.65
SHP1YBL058W PHO85P17157 305 aa4.72□□□□□ -1.65
SHP1YBL058W PCL2P25693 308 aa4.72□□□□□ -1.65
SHP1YBL058W AST1P35183 429 aa4.72□□□□□ -1.65
SHP1YBL058W CBT1P36038 271 aaPredicted RBP4.72□□□□□ -1.65
SHP1YBL058W MDM31P38880 579 aa4.72□□□□□ -1.65
SHP1YBL058W PAC2P39937 518 aa4.72□□□□□ -1.65
SHP1YBL058W SNL1P40548 159 aa4.72□□□□□ -1.65
SHP1YBL058W CAF16P43569 289 aa4.72□□□□□ -1.65
SHP1YBL058W FMP33P46998 180 aa4.72□□□□□ -1.65
SHP1YBL058W SSN8P47821 323 aa4.72□□□□□ -1.65
SHP1YBL058W SPG4Q04438 115 aa4.72□□□□□ -1.65
SHP1YBL058W YMR252CQ04814 134 aa4.72□□□□□ -1.65
SHP1YBL058W NMA1Q06178 401 aaKnown RBP4.72□□□□□ -1.65
SHP1YBL058W YLR173WQ06247 608 aa4.72□□□□□ -1.65
SHP1YBL058W YPL225WQ08971 146 aaKnown RBP4.72□□□□□ -1.65
SHP1YBL058W BBP1Q12365 385 aa4.72□□□□□ -1.65
SHP1YBL058W IDP1P21954 428 aaKnown RBP4.71□□□□□ -1.66
SHP1YBL058W PRP21P32524 280 aaPredicted RBP4.71□□□□□ -1.66
SHP1YBL058W ZUO1P32527 433 aaKnown RBP4.71□□□□□ -1.66
SHP1YBL058W SDS24P38314 527 aa4.71□□□□□ -1.66
SHP1YBL058W FMC1P40491 155 aa4.71□□□□□ -1.66
SHP1YBL058W MRX5P47007 382 aa4.71□□□□□ -1.66
SHP1YBL058W YGL262WP53054 175 aa4.71□□□□□ -1.66
SHP1YBL058W YGL204CP53089 101 aa4.71□□□□□ -1.66
SHP1YBL058W POP6P53218 158 aa4.71□□□□□ -1.66
SHP1YBL058W RPL21AQ02753 160 aaKnown RBP4.71□□□□□ -1.66
SHP1YBL058W HLR1Q04429 423 aa4.71□□□□□ -1.66
SHP1YBL058W ASR1Q06834 288 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms