RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CCDC173Q0VFZ6 552 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 TMEM132DQ14C87 1099 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 MFSD5Q6N075 450 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 FAM43BQ6ZT52 329 aaPredicted RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 SV2AQ7L0J3 742 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 MRPL10Q7Z7H8 261 aaKnown RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 C7orf61Q8IZ16 206 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 LINC01599Q8WXQ3 324 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 KIF12Q96FN5 646 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 ANKRD36BP1Q96IX9 119 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 ERGIC2Q96RQ1 377 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 LSM14BQ9BX40 385 aaKnown RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 INTS2Q9H0H0 1204 aaKnown RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 CXCL16Q9H2A7 254 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 FAM207AQ9NSI2 230 aaPredicted RBP9.48□□□□□ -0.89
HLA-B-258ENST00000640615 RNF19AQ9NV58 838 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 GCNT4Q9P109 453 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 SIK3Q9Y2K2 1263 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 PTPRJQ12913 1337 aa9.48□□□□□ -0.89
HLA-B-258ENST00000640615 SMIM28A0A1B0GU29 152 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 GTPBP10A4D1E9 387 aaKnown RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 MEIS3P2A8K0S8 358 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 C9IYK1 514 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 EVI5O60447 810 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 CLSTN1O94985 981 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 EOMESO95936 686 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PTMAP06454 111 aaKnown RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 CSF2RAP15509 400 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 SLC9A1P19634 815 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PON1P27169 355 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 MLH1P40692 756 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PIK3CAP42336 1068 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 FAM189BP81408 668 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 TRPC3Q13507 836 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 IKBKEQ14164 716 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 TCTN1Q2MV58 587 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 ZACNQ401N2 412 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 GLRA4Q5JXX5 417 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 TDRD10Q5VZ19 366 aaKnown RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 CNKSR3Q6P9H4 555 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 ALKAL1Q6UXT8 129 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 AGMOQ6ZNB7 445 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 C15orf39Q6ZRI6 1047 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 FBXL13Q8NEE6 735 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 NEK11Q8NG66 645 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 TAS1R2Q8TE23 839 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 CPLX3Q8WVH0 158 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 RPS6KC1Q96S38 1066 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 GAD1Q99259 594 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 RSAD1Q9HA92 442 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■■■■■ 149.1
HLA-B-258ENST00000640615 RAB20Q9NX57 234 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 LRFN2Q9ULH4 789 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 GIT1Q9Y2X7 761 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 DERAQ9Y315 318 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 C2CD2Q9Y426 696 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 PCDHB7Q9Y5E2 793 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.47□□□□□ -0.89
HLA-B-258ENST00000640615 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
HLA-B-258ENST00000640615 ARL5CA6NH57 179 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 PMM2O15305 246 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 XPOTO43592 962 aaKnown RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 KRT19P08727 400 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 TPM1P09493 284 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ACRP10323 421 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ACTN1P12814 892 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 KCNE1P15382 129 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ATF7P17544 494 aaPredicted RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 APBA1Q02410 837 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 LRMPQ12912 555 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 NCOA4Q13772 614 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 EPC2Q52LR7 807 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 XKR4Q5GH76 650 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 NT5DC4Q86YG4 428 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 CCDC150Q8NCX0 1101 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms