RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 PPP1R10Q96QC0 940 aaKnown RBP16.1■□□□□ 0.17
TARDBP-231ENST00000639599 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 TIPINQ9BVW5 301 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 CDT1Q9H211 546 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 TMEM134Q9H6X4 195 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 SLC2A4RGQ9NR83 387 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 MRPS23Q9Y3D9 190 aaKnown RBP16.1■□□□□ 0.17
TARDBP-231ENST00000639599 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 ANHXE9PGG2 379 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 E9PMD0 336 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 H3BQV1 296 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 H7C4K7 107 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 PODXLO00592 558 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 PAPLNO95428 1278 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 SEC24BO95487 1268 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 DCNP07585 359 aaKnown RBP16.09■□□□□ 0.17
TARDBP-231ENST00000639599 MCF2P10911 925 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 TKTP29401 623 aaKnown RBP16.09■□□□□ 0.17
TARDBP-231ENST00000639599 ECM1Q16610 540 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 PHLDB3Q6NSJ2 640 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 PARM1Q6UWI2 310 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 ADSSL1Q8N142 457 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 FGF13Q92913 245 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 TARS2Q9BW92 718 aaKnown RBP16.09■□□□□ 0.17
TARDBP-231ENST00000639599 C17orf75Q9HAS0 396 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 GOLGA2P5Q9HBQ8 144 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 ANKFY1Q9P2R3 1169 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 PCDHB6Q9Y5E3 794 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 BACE2Q9Y5Z0 518 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 DENND4AQ7Z401 1863 aa16.09■□□□□ 0.17
TARDBP-231ENST00000639599 I3L4J1 428 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 ADAM12O43184 909 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 EDN1P05305 212 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 POU2F2P09086 479 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 MCM4P33991 863 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 PRPHP41219 470 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 BRCC3P46736 316 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 NAB2Q15742 525 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 UPP1Q16831 310 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 MPZL3Q6UWV2 235 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 BICD1Q96G01 975 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.16
TARDBP-231ENST00000639599 SEMA4AQ9H3S1 761 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
TARDBP-231ENST00000639599 H0YCG3 227 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 SLC16A4O15374 487 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.162e-10■□□□□ 10.5
TARDBP-231ENST00000639599 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-231ENST00000639599 GPC5P78333 572 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 UBXN2BQ14CS0 331 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 CEP120Q8N960 986 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 RASSF8Q8NHQ8 419 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 ING5Q8WYH8 240 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 FGF14Q92915 247 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 SNX27Q96L92 541 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 RUSC1Q9BVN2 902 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 BCO2Q9BYV7 579 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
TARDBP-231ENST00000639599 CYP4F11Q9HBI6 524 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 ARHGAP28Q9P2N2 729 aa16.07■□□□□ 0.16
TARDBP-231ENST00000639599 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
TARDBP-231ENST00000639599 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 SYN3O14994 580 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 LMNAP02545 664 aaKnown RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 RHOP08100 348 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 PRKCQQ04759 706 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 RAD51AP2Q09MP3 1159 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 NOLC1Q14978 699 aaKnown RBP eCLIP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 MLF2Q15773 248 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 CTXN3Q4LDR2 81 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 VARS2Q5ST30 1063 aaKnown RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 IQCEQ6IPM2 695 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 ZNF280DQ6N043 979 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 RINT1Q6NUQ1 792 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 C4orf32Q8N8J7 132 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 PJA1Q8NG27 643 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 KXD1Q9BQD3 176 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 HCFC1R1Q9NWW0 138 aa16.06■□□□□ 0.16
TARDBP-231ENST00000639599 DNMT3BQ9UBC3 853 aaKnown RBP16.06■□□□□ 0.16
TARDBP-231ENST00000639599 KANSL1LA0AUZ9 987 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 ZNF197O14709 1029 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 TOM1L1O75674 476 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 PLS3P13797 630 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 CPB1P15086 417 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 PTPN2P17706 415 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 CDC25AP30304 524 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 ROR1Q01973 937 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 RABEP1Q15276 862 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 CYP4A22Q5TCH4 519 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 PDZD4Q76G19 769 aaPredicted RBP16.05■□□□□ 0.16
TARDBP-231ENST00000639599 C1orf210Q8IVY1 113 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 NPAS3Q8IXF0 933 aa16.05■□□□□ 0.16
TARDBP-231ENST00000639599 ZNF461Q8TAF7 563 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms