RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ZNF227Q86WZ6 799 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 CDK20Q8IZL9 346 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 C2orf69Q8N8R5 385 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 DENND6BQ8NEG7 585 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 TRPV3Q8NET8 790 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 PPP1R14BQ96C90 147 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 KIAA1586Q9HCI6 787 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 TBK1Q9UHD2 729 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ZFP69BQ9UJL9 534 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM24O15164 1050 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 MEFVO15553 781 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-212ENST00000636194 CLTBP09497 229 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 PIK3R1P27986 724 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 HNRNPH1P31943 449 aaKnown RBP6.31□□□□□ -1.4
SCN1A-212ENST00000636194 SOAT1P35610 550 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 TAP1Q03518 808 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 CYGBQ8WWM9 190 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 SNF8Q96H20 258 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 SERPINB12Q96P63 405 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 PITPNM3Q9BZ71 974 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 PKP3Q9Y446 797 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ARHGEF17Q96PE2 2063 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-212ENST00000636194 GUCY1B2O75343 617 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 GUCY2CP25092 1073 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ITGA1P56199 1179 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
SCN1A-212ENST00000636194 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
SCN1A-212ENST00000636194 BNC1Q01954 994 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ELF2Q15723 593 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 ASPRV1Q53RT3 343 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 SNX31Q8N9S9 440 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 NFATC2IPQ8NCF5 419 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 JADE3Q92613 823 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 VPS51Q9UID3 782 aa6.31□□□□□ -1.4
SCN1A-212ENST00000636194 KMOO15229 486 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ADCY6O43306 1168 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ULK1O75385 1050 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 DDHD2O94830 711 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CNPP09543 421 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SDSP20132 328 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 C6orf10Q5SRN2 563 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TRIQKQ629K1 86 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 C16orf89Q6UX73 402 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SPIRE2Q8WWL2 714 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 APPBP2Q92624 585 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CNPPD1Q9BV87 410 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ZWILCHQ9H900 591 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TAB2Q9NYJ8 693 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 hCG_2014768A0A024R1R8 64 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 MEI4A8MW99 385 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 DLGAP3O95886 979 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 EGFRP00533 1210 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 POLA2Q14181 598 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ME3Q16798 604 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 PJA1Q8NG27 643 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 UBE2Q2Q8WVN8 375 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 C17orf80Q9BSJ5 609 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 LRRC40Q9H9A6 602 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 WDR41Q9HAD4 459 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 AP4S1Q9Y587 144 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 hCG_1984214I3L0E3 225 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 KRT33AO76009 404 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 HOXC12P31275 282 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ZYG11AQ6WRX3 759 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ANKRD44Q8N8A2 993 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 PAIP1Q9H074 479 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 PDS5AQ29RF7 1337 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 K7ERI5 159 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TMCC2O75069 709 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 OR7A10O76100 309 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 LRPAP1P30533 357 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CHI3L1P36222 383 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 DR1Q01658 176 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 RHAGQ02094 409 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 PTGES3Q15185 160 aaKnown RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 AKAP4Q5JQC9 854 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 COPS6Q7L5N1 327 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 INPP5DQ92835 1189 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 ITCHQ96J02 903 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 EXO5Q9H790 373 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CYP39A1Q9NYL5 469 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TMCO1Q9UM00 188 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 SNX6Q9UNH7 406 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 A0A0G2JND7 137 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 A0A0X1KG70 313 aa6.3□□□□□ -1.4
SCN1A-212ENST00000636194 TM9SF1O15321 606 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms