RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 GDF15Q99988 308 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 ATP6V0A4Q9HBG4 840 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 HMGB1P1B2RPK0 211 aaPredicted RBP16.69■□□□□ 0.26
CLN8-209ENST00000635970 DGAT1O75907 488 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 FSBPO95073 299 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 EYA4O95677 639 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
CLN8-209ENST00000635970 PDXDC1Q6P996 788 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 KSR1Q8IVT5 923 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 TSEN2Q8NCE0 465 aaKnown RBP16.69■□□□□ 0.26
CLN8-209ENST00000635970 BAP1Q92560 729 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 ZIM3Q96PE6 472 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 OSMRQ99650 979 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 TSG101Q99816 390 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 EPN3Q9H201 632 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 MMRN2Q9H8L6 949 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 POLD4Q9HCU8 107 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 BLOC1S4Q9NUP1 217 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 PPME1Q9Y570 386 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 TRPV2Q9Y5S1 764 aa16.69■□□□□ 0.26
CLN8-209ENST00000635970 LRRC53A6NM62 1247 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 ANKRD65E5RJM6 399 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLN8-209ENST00000635970 GHRP10912 638 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 FAM26DQ5JW98 314 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 RRAGAQ7L523 313 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 CACNA2D4Q7Z3S7 1137 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 RHPN2Q8IUC4 686 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 ARFGAP2Q8N6H7 521 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 NCAPGQ9BPX3 1015 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 CEP72Q9P209 647 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 M0QZ92 97 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 GPR32O75388 356 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 SERPING1P05155 500 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 LIG3P49916 1009 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 SLC7A5Q01650 507 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 PPIGQ13427 754 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLN8-209ENST00000635970 TCTN1Q2MV58 587 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 IER5Q5VY09 327 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 NME8Q8N427 588 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 OTUD6BQ8N6M0 293 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 ARL8AQ96BM9 186 aa16.68■□□□□ 0.26
CLN8-209ENST00000635970 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 TACO1Q9BSH4 297 aaKnown RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 CELF4Q9BZC1 486 aaKnown RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 FAM207AQ9NSI2 230 aaPredicted RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
CLN8-209ENST00000635970 MICAL3Q7RTP6 2002 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 PTPRSQ13332 1948 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 GNA14O95837 355 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLN8-209ENST00000635970 GPC3P51654 580 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 SLC12A3P55017 1021 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 C10orf76Q5T2E6 689 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 PRPF38BQ5VTL8 546 aaKnown RBP16.67■□□□□ 0.26
CLN8-209ENST00000635970 LRIG3Q6UXM1 1119 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 PRPF31Q8WWY3 499 aaKnown RBP16.67■□□□□ 0.26
CLN8-209ENST00000635970 NLRP4Q96MN2 994 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.67■□□□□ 0.265e-8■■■■□ 21.4
CLN8-209ENST00000635970 UBE2OQ9C0C9 1292 aaKnown RBP16.67■□□□□ 0.26
CLN8-209ENST00000635970 IL23AQ9NPF7 189 aa16.67■□□□□ 0.26
CLN8-209ENST00000635970 BTNL10A8MVZ5 291 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 SLC26A4O43511 780 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 RPLP2P05387 115 aaKnown RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 LPIN1Q14693 890 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 NAB2Q15742 525 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 FBXO47Q5MNV8 452 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 C9orf50Q5SZB4 431 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 ASAP3Q8TDY4 903 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 RAD54LQ92698 747 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 MYCBPQ99417 103 aaPredicted RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 ADAMTS10Q9H324 1103 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 AGO3Q9H9G7 860 aaKnown RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 MYH10P35580 1976 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 CXCL10P02778 98 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 CYP11B2P19099 503 aa16.66■□□□□ 0.26
CLN8-209ENST00000635970 HNRNPH1P31943 449 aaKnown RBP16.66■□□□□ 0.26
CLN8-209ENST00000635970 LSP1P33241 339 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms