RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CCDC130P13994 396 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 CDC25BP30305 580 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 EFNA5P52803 228 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 TAF1CQ15572 869 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-209ENST00000635750 UGP2Q16851 508 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 TDRD10Q5VZ19 366 aaKnown RBP5.84□□□□□ -1.48
SCN1A-209ENST00000635750 PCYOX1LQ8NBM8 494 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 TTLL11Q8NHH1 800 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 RASGRP4Q8TDF6 673 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 PIGOQ8TEQ8 1089 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 TSC22D3Q99576 134 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 AP1M1Q9BXS5 423 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 FHDC1Q9C0D6 1143 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-209ENST00000635750 NEUROD4Q9HD90 331 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 KIF24Q5T7B8 1368 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 CARMIL3Q8ND23 1372 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 ABCA5Q8WWZ7 1642 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 MMP10P09238 476 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PHKA1P46020 1223 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 VAMP7P51809 220 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PDIA6Q15084 440 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 TTLL9Q3SXZ7 439 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SWSAP1Q6NVH7 229 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PROM2Q8N271 834 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SLC7A14Q8TBB6 771 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CALML6Q8TD86 181 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 DNAJC1Q96KC8 554 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ARHGEF38Q9NXL2 777 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 NOVA2Q9UNW9 492 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 H7C4K7 107 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 NFICP08651 508 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CHI3L1P36222 383 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 KCNB1Q14721 858 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 C6orf10Q5SRN2 563 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 BTNL9Q6UXG8 535 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 BCL2L14Q9BZR8 327 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 USP44Q9H0E7 712 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 EXO5Q9H790 373 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 HPS4Q9NQG7 708 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 RBAKQ9NYW8 714 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 APPL1Q9UKG1 709 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 FAM135BQ49AJ0 1406 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 THOC2Q8NI27 1593 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 F8W810 466 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 M0R3G1 203 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 NR1D1P20393 614 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 QARSP47897 775 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 GPSM2P81274 684 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CYTH1Q15438 398 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CNGA3Q16281 694 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 P3H1Q32P28 736 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 FAM117BQ6P1L5 589 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 RINLQ6ZS11 566 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 DCP1BQ8IZD4 617 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SYNE4Q8N205 404 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 JADE3Q92613 823 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 GINS4Q9BRT9 223 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 STK33Q9BYT3 514 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SOX13Q9UN79 622 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SMIM22K7EJ46 135 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 MYO1CO00159 1063 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SEC24BO95487 1268 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ENO2P09104 434 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CYP2C19P33261 490 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 EIF4A3P38919 411 aaKnown RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 OR1G1P47890 313 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 TCEAL5Q5H9L2 206 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 POTEEQ6S8J3 1075 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CDR2LQ86X02 465 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-209ENST00000635750 COMMD2Q86X83 199 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 NUP93Q8N1F7 819 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ATP11CQ8NB49 1132 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PTPRN2Q92932 1015 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 OLFM3Q96PB7 478 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CAMKK2Q96RR4 588 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ADGRA2Q96PE1 1338 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 KDM5DQ9BY66 1539 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PNMA6EA0A0J9YXQ4 647 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 FGGP02679 453 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 PGK2P07205 417 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 ITGA4P13612 1032 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 NNTQ13423 1086 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 BFSP2Q13515 415 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 CDH18Q13634 790 aa5.83□□□□□ -1.48
SCN1A-209ENST00000635750 SV2CQ496J9 727 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms