RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 TSKSQ9UJT2 592 aa10.78□□□□□ -0.68
CACNA1A-216ENST00000635742 GUCA1BQ9UMX6 200 aa10.78□□□□□ -0.68
CACNA1A-216ENST00000635742 UMODL1Q5DID0 1318 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 TUBB4AP04350 444 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 INHAP05111 366 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 GNAT1P11488 350 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 MAGEA1P43355 309 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 CDC42EP1Q00587 391 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 ZNF662Q6ZS27 426 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 SHC3Q92529 594 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 ARID3AQ99856 593 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 C1orf112Q9NSG2 853 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 SAGE1Q9NXZ1 904 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 NENFQ9UMX5 172 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 DUSP10Q9Y6W6 482 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 CITO14578 2027 aa10.77□□□□□ -0.69
CACNA1A-216ENST00000635742 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 DDX3XO00571 662 aaKnown RBP eCLIP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 KIF5CO60282 957 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 B4GALT4O60513 344 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 NPTXRO95502 500 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 GNRH1P01148 92 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 NFICP08651 508 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 CLTAP09496 248 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 MFAP3P55082 362 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 GCNT1Q02742 428 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 SURF1Q15526 300 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 TAF2Q6P1X5 1199 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 TRAPPC11Q7Z392 1133 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 DNAAF5Q86Y56 855 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 SLC35F6Q8N357 371 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 SLC20A1Q8WUM9 679 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 PACSIN1Q9BY11 444 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 LACTBL1A8MY62 500 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 KRT86O43790 486 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 PHACTR2O75167 634 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 IL18RAPO95256 599 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 TMEM191BP0C7N4 346 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 EIF4BP23588 611 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 USP8P40818 1118 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 AP3M2P53677 418 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 TFAMQ00059 246 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 NCOA4Q13772 614 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 ZNF569Q5MCW4 686 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 FAM71AQ8IYT1 594 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 VTI1AQ96AJ9 217 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 ADPGKQ9BRR6 497 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 EIF2AQ9BY44 585 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 ACP6Q9NPH0 428 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 PAXBP1Q9Y5B6 917 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 PTCH2Q9Y6C5 1203 aa10.76□□□□□ -0.69
CACNA1A-216ENST00000635742 MROH7Q68CQ1 1323 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 PDCD11Q14690 1871 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 MACROD2A1Z1Q3 448 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 PJA2O43164 708 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 CYP26A1O43174 497 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SGPL1O95470 568 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 CST3P01034 146 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 ANXA13P27216 316 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 GRM5P41594 1212 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 CRYBB1P53674 252 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 MYL6P60660 151 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 MRPS6P82932 125 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SLC10A6Q3KNW5 377 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 DCAF4L1Q3SXM0 396 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 WDR44Q5JSH3 913 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 JADE1Q6IE81 842 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SLC27A1Q6PCB7 646 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SESTD1Q86VW0 696 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 PALB2Q86YC2 1186 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 FMNL3Q8IVF7 1028 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 NME8Q8N427 588 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SLC30A5Q8TAD4 765 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 SALL4Q9UJQ4 1053 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 NAGPAQ9UK23 515 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 CDY2AQ9Y6F7 541 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 TRIP11Q15643 1979 aa10.75□□□□□ -0.69
CACNA1A-216ENST00000635742 ASS1P00966 412 aaKnown RBP10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 CALCAP01258 141 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 TNNC2P02585 160 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 CTSHP09668 335 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 CCDC172P0C7W6 258 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 CASQ1P31415 396 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 CUL2Q13617 745 aa10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.69
CACNA1A-216ENST00000635742 DUOXA2Q1HG44 320 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms