RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 KCNG1Q9UIX4 513 aa11.79□□□□□ -0.52
CHD2-217ENST00000629136 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
CHD2-217ENST00000629136 SCN1AP35498 2009 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 A0A087X0B3 334 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 CLDN3O15551 220 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 TRAK2O60296 914 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 RFPL2O75678 378 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 B3GAT3O94766 335 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 PAPLNO95428 1278 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 C1RP00736 705 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 PIGRP01833 764 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
CHD2-217ENST00000629136 SPATA31D3P0C874 917 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 MYBP10242 640 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 KCNE1P15382 129 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 NMT1P30419 496 aaKnown RBP11.78□□□□□ -0.52
CHD2-217ENST00000629136 DDIT3P35638 169 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 TNFSF9P41273 254 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 BRCC3P46736 316 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 CREMQ03060 361 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 PSMD5Q16401 504 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 SLC10A6Q3KNW5 377 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
CHD2-217ENST00000629136 SPATA31D4Q6ZUB0 917 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 CEP57Q86XR8 500 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 MAP4K3Q8IVH8 894 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 HSCBQ8IWL3 235 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 CMASQ8NFW8 434 aaPredicted RBP11.78□□□□□ -0.52
CHD2-217ENST00000629136 EDAQ92838 391 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 BICD1Q96G01 975 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 CLSTN3Q9BQT9 956 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 TBX20Q9UMR3 447 aa11.78□□□□□ -0.52
CHD2-217ENST00000629136 WDFY4Q6ZS81 3184 aa11.77□□□□□ -0.52
CHD2-217ENST00000629136 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 ADAM12O43184 909 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 TBCAO75347 108 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 CXCL8P10145 99 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 FGFR3P22607 806 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 TKTP29401 623 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 TXLNAP40222 546 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 ZXDAP98168 799 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 GTF2BQ00403 316 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 ELAVL2Q12926 359 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 ATAT1Q5SQI0 421 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 ZBTB41Q5SVQ8 909 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 SFR1Q86XK3 245 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 TDRD5Q8NAT2 981 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 DDX12PQ92771 950 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 C18orf25Q96B23 403 aaPredicted RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 ZNF707Q96C28 371 aaPredicted RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
CHD2-217ENST00000629136 RHOBTB2Q9BYZ6 727 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 ZHX3Q9H4I2 956 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 TUBGCP4Q9UGJ1 667 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 USTQ9Y2C2 406 aa11.77□□□□□ -0.53
CHD2-217ENST00000629136 CCDC195A0A1B0GUA6 201 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 TTC26A0AVF1 554 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 MYMKA6NI61 221 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 TISP43B9A030 160 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 I3L4J1 428 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 PODXLO00592 558 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
CHD2-217ENST00000629136 PPP1R37O75864 691 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 SCP2P22307 547 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 MATR3P43243 847 aaKnown RBP eCLIP11.76□□□□□ -0.539e-10■■□□□ 13.9
CHD2-217ENST00000629136 LIG4P49917 911 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 STK38Q15208 465 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 ZC2HC1CQ53FD0 456 aaPredicted RBP11.76□□□□□ -0.53
CHD2-217ENST00000629136 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 RSPO2Q6UXX9 243 aaPredicted RBP11.76□□□□□ -0.53
CHD2-217ENST00000629136 HFE2Q6ZVN8 426 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 ST6GALNAC4Q9H4F1 302 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 DPP7Q9UHL4 492 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 CLUHO75153 1309 aa11.76□□□□□ -0.53
CHD2-217ENST00000629136 A0A0B4J269 797 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 FRMD3A2A2Y4 597 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 SPTLC2O15270 562 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 OGTO15294 1046 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 PPP6R2O75170 966 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 F13A1P00488 732 aa11.75□□□□□ -0.53
CHD2-217ENST00000629136 CLTAP09496 248 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms