RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 ADALQ6DHV7 355 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 ANKRD54Q6NXT1 300 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 CEP57Q86XR8 500 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 RNF168Q8IYW5 571 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-246ENST00000628979 CEP57L1Q8IYX8 460 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 RIN2Q8WYP3 895 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-246ENST00000628979 HPS3Q969F9 1004 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 HVCN1Q96D96 273 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 FGFBP2Q9BYJ0 223 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 TRIM9Q9C026 710 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 BLZF1Q9H2G9 400 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 GDPD2Q9HCC8 539 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 SLC38A7Q9NVC3 462 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 SERTAD1Q9UHV2 236 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 EXOC7Q9UPT5 735 aa22.53■■□□□ 1.2
CIRBP-246ENST00000628979 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■■■■ 35.3
CIRBP-246ENST00000628979 A0A0B4J269 797 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 LILRB3O75022 631 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 B3GAT3O94766 335 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 PRPF6O94906 941 aaKnown RBP22.52■■□□□ 1.2
CIRBP-246ENST00000628979 EFEMP2O95967 443 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 KCNE1P15382 129 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 DSG1Q02413 1049 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 FAM171A1Q5VUB5 890 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 DCLRE1AQ6PJP8 1040 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 TMEM184AQ6ZMB5 413 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 GRAMD1CQ8IYS0 662 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 SYCP3Q8IZU3 236 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 UROC1Q96N76 676 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 C7orf25Q9BPX7 421 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 STRA6Q9BX79 667 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 SCAND2PQ9GZW5 306 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-246ENST00000628979 RPF1Q9H9Y2 349 aaKnown RBP22.52■■□□□ 1.2
CIRBP-246ENST00000628979 MAGEF1Q9HAY2 307 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 OLFML3Q9NRN5 406 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 VCANP13611 3396 aa22.52■■□□□ 1.2
CIRBP-246ENST00000628979 SPDYE4A6NLX3 237 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 LACTBL1A8MY62 500 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 TNFRSF10AO00220 468 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PPP1R37O75864 691 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PFKFB1P16118 471 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 CMA1P23946 247 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 NUCB2P80303 420 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PPP2R3AQ06190 1150 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 KYAT1Q16773 422 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 UPP1Q16831 310 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 SLFN12LQ6IEE8 588 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PPFIBP1Q86W92 1011 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 GLYCTKQ8IVS8 523 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 SMRP1Q8NCR6 262 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 POMGNT1Q8WZA1 660 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PYM1Q9BRP8 204 aaKnown RBP22.51■■□□□ 1.19
CIRBP-246ENST00000628979 CHST7Q9NS84 486 aa22.51■■□□□ 1.19
CIRBP-246ENST00000628979 AGO2Q9UKV8 859 aaKnown RBP22.51■■□□□ 1.19
CIRBP-246ENST00000628979 PODXLO00592 558 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 ACOT2P49753 483 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 SMAD2Q15796 467 aaKnown RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 ENOX2Q16206 610 aaKnown RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 SYCE2Q6PIF2 218 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 PRSS55Q6UWB4 352 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 TMEM130Q8N3G9 435 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 SLC22A17Q8WUG5 538 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 DDX27Q96GQ7 796 aaKnown RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 TTPALQ9BTX7 342 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 PLEKHA5Q9HAU0 1116 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 TUBGCP4Q9UGJ1 667 aa22.5■■□□□ 1.19
CIRBP-246ENST00000628979 USP15Q9Y4E8 981 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-246ENST00000628979 TTC26A0AVF1 554 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 I3L4J1 428 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 TEX28O15482 410 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 FAM189A1O60320 539 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 RPL17P18621 184 aaKnown RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 SSTR3P32745 418 aaPredicted RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 BRCC3P46736 316 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 ELAVL2Q12926 359 aaKnown RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 CUL4BQ13620 913 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 ALCAMQ13740 583 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 RTP2Q5QGT7 225 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 C3orf58Q8NDZ4 430 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 GLIS3Q8NEA6 775 aa22.49■■□□□ 1.19
CIRBP-246ENST00000628979 NOC3LQ8WTT2 800 aaKnown RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 CPSF3Q9UKF6 684 aaKnown RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 PDCD11Q14690 1871 aaKnown RBP22.49■■□□□ 1.19
CIRBP-246ENST00000628979 ADH1AP07327 375 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 HOXB8P17481 243 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-246ENST00000628979 CLCN4P51793 760 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 POSTNQ15063 836 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 RARS2Q5T160 578 aaKnown RBP22.48■■□□□ 1.19
CIRBP-246ENST00000628979 CD300LGQ6UXG3 332 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 STXBP4Q6ZWJ1 553 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 PALB2Q86YC2 1186 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 FSIP1Q8NA03 581 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 PAGE5Q96GU1 130 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 FBXL18Q96ME1 805 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 S1PR5Q9H228 398 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 RXFP1Q9HBX9 757 aa22.48■■□□□ 1.19
CIRBP-246ENST00000628979 STYXL1Q9Y6J8 313 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms