RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 MIOSQ9NXC5 875 aa8.47□□□□□ -1.05
TCF4-260ENST00000627685 DNAJB4Q9UDY4 337 aa8.47□□□□□ -1.05
TCF4-260ENST00000627685 FBXO2Q9UK22 296 aaPredicted RBP8.47□□□□□ -1.05
TCF4-260ENST00000627685 PIN4Q9Y237 131 aaKnown RBP8.47□□□□□ -1.05
TCF4-260ENST00000627685 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
TCF4-260ENST00000627685 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
TCF4-260ENST00000627685 EVPLQ92817 2033 aa8.47□□□□□ -1.05
TCF4-260ENST00000627685 CNTNAP2Q9UHC6 1331 aa8.47□□□□□ -1.05
TCF4-260ENST00000627685 A0A087X0B3 334 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 LAD1O00515 517 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 DDHD2O94830 711 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 SRGAP2CP0DJJ0 459 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 FGFR3P22607 806 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 DNM2P50570 870 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 SLC12A3P55017 1021 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 ERVFC1P60507 584 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 UBE3AQ05086 875 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 DSC1Q08554 894 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 FAM187BQ17R55 369 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 LEXMQ3ZCV2 418 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 C1orf186Q6ZWK4 172 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 ZNF280BQ86YH2 543 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 ANKMY2Q8IV38 441 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 HELQQ8TDG4 1101 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 SNX29Q8TEQ0 813 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 PABPC5Q96DU9 382 aaKnown RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 CPB2Q96IY4 423 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 MSLNLQ96KJ4 702 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 INO80BQ9C086 356 aaPredicted RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 BHMT2Q9H2M3 363 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 NRDE2Q9H7Z3 1164 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 UPF2Q9HAU5 1272 aaKnown RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.06
TCF4-260ENST00000627685 TBC1D13Q9NVG8 400 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 CLEC1BQ9P126 229 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 ARHGAP28Q9P2N2 729 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 LRWD1Q9UFC0 647 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 SMC3Q9UQE7 1217 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 HES2Q9Y543 173 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 IPPQ9Y573 584 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 PCDHB7Q9Y5E2 793 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 PCDHB2Q9Y5E7 798 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 CLIC4Q9Y696 253 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 BRWD1Q9NSI6 2320 aa8.46□□□□□ -1.06
TCF4-260ENST00000627685 A0A1B0GUA9 196 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 TBKBP1A7MCY6 615 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 PTGESO14684 152 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 FGF18O76093 207 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 EYA4O95677 639 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 EOMESO95936 686 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 BMP4P12644 408 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 ZSCAN20P17040 1043 aaPredicted RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 NCLP19338 710 aaKnown RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 PROZP22891 400 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 SFPQP23246 707 aaKnown RBP eCLIP8.45□□□□□ -1.06
TCF4-260ENST00000627685 MAP2K3P46734 347 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 PLCB3Q01970 1234 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 SF3A1Q15459 793 aaKnown RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 LONRF3Q496Y0 759 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 NT5DC1Q5TFE4 455 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 ARL6IP4Q66PJ3 421 aaKnown RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 MAEAQ7L5Y9 396 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 OTUD6AQ7L8S5 288 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 LRRC43Q8N309 656 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 POF1BQ8WVV4 589 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 TCP11Q8WWU5 503 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 ACDQ96AP0 544 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 NACC1Q96RE7 527 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 USP28Q96RU2 1077 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 HAPLN2Q9GZV7 340 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 PDZD7Q9H5P4 517 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 PTPRHQ9HD43 1115 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 NDFIP2Q9NV92 336 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 DACT1Q9NYF0 836 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 NOL7Q9UMY1 257 aaKnown RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.45□□□□□ -1.06
TCF4-260ENST00000627685 ZMYM2Q9UBW7 1377 aa8.45□□□□□ -1.06
TCF4-260ENST00000627685 MYH15Q9Y2K3 1946 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 CARNS1A5YM72 827 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 HIDE1A8MVS5 230 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 KHNYNO15037 678 aaKnown RBP8.44□□□□□ -1.06
TCF4-260ENST00000627685 ASAP2O43150 1006 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 FAM189A1O60320 539 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 MARCH6O60337 910 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 GUCY2CP25092 1073 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 CCT6AP40227 531 aaKnown RBP8.44□□□□□ -1.06
TCF4-260ENST00000627685 NAMPTP43490 491 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 NPTX2P47972 431 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 SLC11A1P49279 550 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 CTBSQ01459 385 aa8.44□□□□□ -1.06
TCF4-260ENST00000627685 MXD4Q14582 209 aaPredicted RBP8.44□□□□□ -1.06
TCF4-260ENST00000627685 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms