RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 UBE2TQ9NPD8 197 aaPredicted RBP11.17□□□□□ -0.62
ATRX-216ENST00000624403 TRIM10Q9UDY6 481 aa11.17□□□□□ -0.62
ATRX-216ENST00000624403 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
ATRX-216ENST00000624403 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
ATRX-216ENST00000624403 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
ATRX-216ENST00000624403 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
ATRX-216ENST00000624403 SMIM35A0A1B0GVV1 85 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 KPNA6O60684 536 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 CSDE1O75534 798 aaKnown RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 GFPT2O94808 682 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 C4BPAP04003 597 aaKnown RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 CYP2C9P11712 490 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 ELNP15502 786 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 TNNI1P19237 187 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 MAP2K2P36507 400 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 PRKCIP41743 596 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 VEGFBP49765 207 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 ADAM17P78536 824 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 PTK2Q05397 1052 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 GFPT1Q06210 699 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 CACNB2Q08289 660 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 ARHGAP44Q17R89 818 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 ZNF571Q7Z3V5 609 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 ZNF410Q86VK4 478 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 FBXL13Q8NEE6 735 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 CD99L2Q8TCZ2 262 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 SCLT1Q96NL6 688 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 WDR24Q96S15 920 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 FAM49AQ9H0Q0 323 aaPredicted RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 CDT1Q9H211 546 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.62
ATRX-216ENST00000624403 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 PAXBP1Q9Y5B6 917 aa11.16□□□□□ -0.62
ATRX-216ENST00000624403 BZW2Q9Y6E2 419 aaKnown RBP11.16□□□□□ -0.62
ATRX-216ENST00000624403 FOXN3O00409 490 aaPredicted RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 FANCGO15287 622 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 SEPT4O43236 478 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 KIF5CO60282 957 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 TSPAN1O60635 241 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 PGK1P00558 417 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 RARBP10826 455 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 MCF2P10911 925 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 CCND3P30281 292 aaPredicted RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 MAGEA1P43355 309 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 VAV2P52735 878 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 NKX3-2P78367 333 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 KIZQ2M2Z5 673 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 ZACNQ401N2 412 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 GNASQ5JWF2 1037 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 SRGAP1Q7Z6B7 1085 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 KAT5Q92993 513 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 VTI1AQ96AJ9 217 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 CPB2Q96IY4 423 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 NT5C1BQ96P26 610 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.15□□□□□ -0.62
ATRX-216ENST00000624403 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.62
ATRX-216ENST00000624403 LACRTQ9GZZ8 138 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 PDZD7Q9H5P4 517 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 SRRDQ9UH36 339 aa11.15□□□□□ -0.62
ATRX-216ENST00000624403 A0A087X0T9 212 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 GPR25O00155 361 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 TREHO43280 583 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
ATRX-216ENST00000624403 GPR32O75388 356 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 VNN1O95497 513 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 FAM228BP0C875 321 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
ATRX-216ENST00000624403 FGFR4P22455 802 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 YY1P25490 414 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 ANXA13P27216 316 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 HOXD10P28358 340 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 HOXC8P31273 242 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 CASQ1P31415 396 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 PIK3CAP42336 1068 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 MFAP3P55082 362 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 TMEM62Q0P6H9 643 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 BIRC3Q13489 604 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 SLC18A3Q16572 532 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 ZNF569Q5MCW4 686 aa11.14□□□□□ -0.63
ATRX-216ENST00000624403 CCDC122Q5T0U0 273 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms