RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 MYBP10242 640 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CNGA1P29973 690 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ABCD1P33897 745 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SERPINB4P48594 390 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CDH6P55285 790 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 OCA2Q04671 838 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 PPP1R18Q6NYC8 613 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TRIM65Q6PJ69 517 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TMEM117Q9H0C3 514 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 FAM96AQ9H5X1 160 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 KIAA1586Q9HCI6 787 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CYP26B1Q9NR63 512 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SUN2Q9UH99 717 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TRIM33Q9UPN9 1127 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 A0A1W2PQJ5 194 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SPDYE2BA6NHP3 402 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SEC24DO94855 1032 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 EYA4O95677 639 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SPDYE6P0CI01 402 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SDC4P31431 198 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ATXN3P54252 364 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ROR1Q01973 937 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ZC2HC1CQ53FD0 456 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CLEC4GQ6UXB4 293 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CYFIP1Q7L576 1253 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 BBS5Q8N3I7 341 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 NSUN4Q96CB9 384 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 MTBPQ96DY7 904 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RANBP17Q9H2T7 1088 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TDRD3Q9H7E2 651 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ATP6V0A4Q9HBG4 840 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RAVER2Q9HCJ3 691 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 STRIP2Q9ULQ0 834 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 L3MBTL1Q9Y468 752 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 USP31Q70CQ4 1352 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TAC1P20366 129 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 JAK3P52333 1124 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CNGA3Q16281 694 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RARS2Q5T160 578 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 POLR3CQ9BUI4 534 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 COA1Q9GZY4 146 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ABCF3Q9NUQ8 709 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 GABBR1Q9UBS5 961 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 GOLGA8CPA6NN73 597 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 M0QYV0 167 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CHEK2O96017 543 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CYP19A1P11511 503 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SCTRP47872 440 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ITGA8P53708 1063 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SESN2P58004 480 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 EIF3EP60228 445 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 TRIM28Q13263 835 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 MAPK6Q16659 721 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 FAM102AQ5T9C2 384 aaPredicted RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 SWSAP1Q6NVH7 229 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 RNF135Q8IUD6 432 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 NCLNQ969V3 563 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 DNAJC7Q99615 494 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 CACYBPQ9HB71 228 aaKnown RBP5.95□□□□□ -1.46
ERCC6-213ENST00000624341 LZTS1Q9Y250 596 aa5.95□□□□□ -1.46
ERCC6-213ENST00000624341 ANP32DO95626 131 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TARSP26639 723 aaKnown RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 ATICP31939 592 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 MAGEA4P43358 317 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 CRKP46108 304 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TOB1P50616 345 aaPredicted RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 HERVK_113P62684 666 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TRIP10Q15642 601 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 EPC2Q52LR7 807 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 PAPD7Q5XG87 772 aaKnown RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 KCNB2Q92953 911 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 MAP3K14Q99558 947 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 DHX35Q9H5Z1 703 aaKnown RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TBC1D22BQ9NU19 505 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 PARVAQ9NVD7 372 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 LCMT1Q9UIC8 334 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 LOC100653049A0A140TA62 436 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 SYCE1LA8MT33 242 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 NEMP1O14524 444 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 KRT34O76011 436 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 APRTP07741 180 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 MYBL1P10243 752 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 PYGBP11216 843 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TBXAS1P24557 533 aaPredicted RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 SMARCA1P28370 1054 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 PRAMEP78395 509 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 EFTUD2Q15029 972 aaKnown RBP eCLIP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 SPOUT1Q5T280 376 aaKnown RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 KLHDC7AQ5VTJ3 777 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 LVRNQ6Q4G3 990 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 EPS8L3Q8TE67 593 aaKnown RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 CEP19Q96LK0 163 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 TRIM15Q9C019 465 aa5.94□□□□□ -1.46
ERCC6-213ENST00000624341 RBAKQ9NYW8 714 aaPredicted RBP5.94□□□□□ -1.46
ERCC6-213ENST00000624341 UVRAGQ9P2Y5 699 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms