RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MRE11P49959 708 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 NUBP1P53384 320 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 PPM1LQ5SGD2 360 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 SNX27Q96L92 541 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 MYADMQ96S97 322 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 LARSQ9P2J5 1176 aaKnown RBP26.28■■□□□ 1.8
ATXN3-253ENST00000621269 ANKFY1Q9P2R3 1169 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 DUSP12Q9UNI6 340 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 ZNF318Q5VUA4 2279 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 MUC6Q6W4X9 2439 aa26.28■■□□□ 1.8
ATXN3-253ENST00000621269 H0YCG3 227 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 ABLIM1O14639 778 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 ADAM12O43184 909 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 C8AP07357 584 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 MAPTP10636 758 aaKnown RBP26.27■■□□□ 1.8
ATXN3-253ENST00000621269 KCNE1P15382 129 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 IGFBP6P24592 240 aaPredicted RBP26.27■■□□□ 1.8
ATXN3-253ENST00000621269 OR1D2P34982 312 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 TCF15Q12870 199 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 RAB33AQ14088 237 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 GET4Q7L5D6 327 aaPredicted RBP26.27■■□□□ 1.8
ATXN3-253ENST00000621269 ZBTB45Q96K62 511 aaPredicted RBP26.27■■□□□ 1.8
ATXN3-253ENST00000621269 MTRRQ9UBK8 725 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 FBXL21Q9UKT6 434 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 KMT2EQ8IZD2 1858 aa26.27■■□□□ 1.8
ATXN3-253ENST00000621269 NPHP3-ACAD11A0A0J9YXS1 232 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 PODXLO00592 558 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 TKTP29401 623 aaKnown RBP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 MATR3P43243 847 aaKnown RBP eCLIP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 BRCC3P46736 316 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 CACNB1Q02641 598 aaPredicted RBP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 SOX4Q06945 474 aaPredicted RBP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 NOLC1Q14978 699 aaKnown RBP eCLIP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 ASTLQ6HA08 431 aaPredicted RBP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 CD300LGQ6UXG3 332 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 ZPBP2Q6X784 338 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 ANKS3Q6ZW76 656 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 C3orf58Q8NDZ4 430 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 RASSF8Q8NHQ8 419 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 NXPE3Q969Y0 559 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 ZMAT2Q96NC0 199 aaKnown RBP26.26■■□□□ 1.79
ATXN3-253ENST00000621269 IRF2BPLQ9H1B7 796 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 CNTN3Q9P232 1028 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 CDY1Q9Y6F8 540 aa26.26■■□□□ 1.79
ATXN3-253ENST00000621269 I3L4J1 428 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 CLDN3O15551 220 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 XYLBO75191 536 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 FSHRP23945 695 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 DHX8Q14562 1220 aaKnown RBP26.25■■□□□ 1.79
ATXN3-253ENST00000621269 ARSHQ5FYA8 562 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 AXDND1Q5T1B0 1012 aaPredicted RBP26.25■■□□□ 1.79
ATXN3-253ENST00000621269 GRASPQ7Z6J2 395 aaPredicted RBP26.25■■□□□ 1.79
ATXN3-253ENST00000621269 RSAD2Q8WXG1 361 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 BICD1Q96G01 975 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 ODF2LQ9ULJ1 636 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 POLIQ9UNA4 740 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 BACE2Q9Y5Z0 518 aa26.25■■□□□ 1.79
ATXN3-253ENST00000621269 VPS37CA5D8V6 355 aaPredicted RBP26.24■■□□□ 1.79
ATXN3-253ENST00000621269 LAMP2P13473 410 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 HOXA9P31269 272 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 RPL9P32969 192 aaKnown RBP26.24■■□□□ 1.79
ATXN3-253ENST00000621269 LONP1P36776 959 aaKnown RBP26.24■■□□□ 1.79
ATXN3-253ENST00000621269 UVSSAQ2YD98 709 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 GPBP1Q86WP2 473 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 FLCNQ8NFG4 579 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 SLC7A14Q8TBB6 771 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 NUB1Q9Y5A7 615 aa26.24■■□□□ 1.79
ATXN3-253ENST00000621269 ZFP37Q9Y6Q3 630 aaPredicted RBP26.24■■□□□ 1.79
ATXN3-253ENST00000621269 MTCL1Q9Y4B5 1905 aaKnown RBP26.24■■□□□ 1.79
ATXN3-253ENST00000621269 MYO10Q9HD67 2058 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 CCL16O15467 120 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 KRT18P05783 430 aaKnown RBP26.23■■□□□ 1.79
ATXN3-253ENST00000621269 PDCP20941 246 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 CLCN5P51795 746 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 NCKAP1LP55160 1127 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 SF3A1Q15459 793 aaKnown RBP26.23■■□□□ 1.79
ATXN3-253ENST00000621269 SEZ6Q53EL9 994 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 HAUS6Q7Z4H7 955 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 SLC44A3Q8N4M1 653 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 TMEM105Q8N8V8 129 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 C18orf25Q96B23 403 aaPredicted RBP26.23■■□□□ 1.79
ATXN3-253ENST00000621269 REEP2Q9BRK0 252 aa26.23■■□□□ 1.79
ATXN3-253ENST00000621269 GALR2O43603 387 aaPredicted RBP26.22■■□□□ 1.79
ATXN3-253ENST00000621269 NARSO43776 548 aaKnown RBP26.22■■□□□ 1.79
ATXN3-253ENST00000621269 MCL1Q07820 350 aa26.22■■□□□ 1.79
ATXN3-253ENST00000621269 CUL4AQ13619 759 aa26.22■■□□□ 1.79
ATXN3-253ENST00000621269 RSPO2Q6UXX9 243 aaPredicted RBP26.22■■□□□ 1.79
ATXN3-253ENST00000621269 RTL10Q7L3V2 364 aa26.22■■□□□ 1.79
ATXN3-253ENST00000621269 SIX5Q8N196 739 aa26.22■■□□□ 1.79
ATXN3-253ENST00000621269 MYCT1Q8N699 235 aa26.22■■□□□ 1.79
ATXN3-253ENST00000621269 FAM13AO94988 1023 aa26.21■■□□□ 1.79
ATXN3-253ENST00000621269 SCP2P22307 547 aa26.21■■□□□ 1.79
ATXN3-253ENST00000621269 KARSQ15046 597 aaKnown RBP26.21■■□□□ 1.79
ATXN3-253ENST00000621269 SLC10A6Q3KNW5 377 aa26.21■■□□□ 1.79
ATXN3-253ENST00000621269 ATOH1Q92858 354 aaPredicted RBP26.21■■□□□ 1.79
ATXN3-253ENST00000621269 PHOX2BQ99453 314 aa26.21■■□□□ 1.79
ATXN3-253ENST00000621269 H7C4K7 107 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 SYN3O14994 580 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 CFHP08603 1231 aa26.2■■□□□ 1.78
ATXN3-253ENST00000621269 PLCG1P19174 1290 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms