RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NOLC1Q14978 699 aaKnown RBP eCLIP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 ELMSAN1Q6PJG2 1045 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 DCLRE1AQ6PJP8 1040 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 ZPBP2Q6X784 338 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 HAUS6Q7Z4H7 955 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 BMP8AQ7Z5Y6 402 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 MYCT1Q8N699 235 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 SMG7Q92540 1137 aaKnown RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 C18orf25Q96B23 403 aaPredicted RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 MFSD14AQ96MC6 490 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 UROC1Q96N76 676 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 CCSER1Q9C0I3 900 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 DPP7Q9UHL4 492 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 ARIH1Q9Y4X5 557 aaPredicted RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 MYO10Q9HD67 2058 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 N4BP1O75113 896 aaKnown RBP18.77■□□□□ 0.6
HMGN3-203ENST00000620514 FAM13AO94988 1023 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 C1RP00736 705 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 KCNE1P15382 129 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 ZNF131P52739 623 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 MCL1Q07820 350 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 SLC10A6Q3KNW5 377 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 OTOP3Q7RTS5 596 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 TMEM130Q8N3G9 435 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
HMGN3-203ENST00000620514 CLIC6Q96NY7 704 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 CNTN3Q9P232 1028 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 SORCS3Q9UPU3 1222 aa18.77■□□□□ 0.6
HMGN3-203ENST00000620514 MTCL1Q9Y4B5 1905 aaKnown RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 K7ENM7 598 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 PODXLO00592 558 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 PAPLNO95428 1278 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 KRT18P05783 430 aaKnown RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 TKTP29401 623 aaKnown RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 MTMR3Q13615 1198 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 ACSF2Q96CM8 615 aaPredicted RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 BICD1Q96G01 975 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 FIZ1Q96SL8 496 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 RHOBTB2Q9BYZ6 727 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 ZHX3Q9H4I2 956 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 PARVGQ9HBI0 331 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 WDR6Q9NNW5 1121 aaKnown RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 SLC38A7Q9NVC3 462 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 ZDHHC7Q9NXF8 308 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 FBXW11Q9UKB1 542 aa18.76■□□□□ 0.59
HMGN3-203ENST00000620514 SRPRBQ9Y5M8 271 aaKnown RBP18.76■□□□□ 0.59
HMGN3-203ENST00000620514 CLUHO75153 1309 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 ZNF318Q5VUA4 2279 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 CITO14578 2027 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 H0YCG3 227 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 CLDN3O15551 220 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 ZMYND10O75800 440 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 PDGFBP01127 241 aaPredicted RBP18.75■□□□□ 0.59
HMGN3-203ENST00000620514 CXCL8P10145 99 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 DDIT3P35638 169 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 CYP26C1Q6V0L0 522 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 KCNN1Q92952 543 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 DDX27Q96GQ7 796 aaKnown RBP18.75■□□□□ 0.59
HMGN3-203ENST00000620514 PRKD2Q9BZL6 878 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 PIDD1Q9HB75 910 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 MTRRQ9UBK8 725 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 TBX20Q9UMR3 447 aa18.75■□□□□ 0.59
HMGN3-203ENST00000620514 STX6O43752 255 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 TRAK2O60296 914 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 TBCAO75347 108 aaKnown RBP18.74■□□□□ 0.59
HMGN3-203ENST00000620514 NMT1P30419 496 aaKnown RBP18.74■□□□□ 0.59
HMGN3-203ENST00000620514 OR1D2P34982 312 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 TNFSF9P41273 254 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 LIG4P49917 911 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 SPAG1Q07617 926 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 ZBTB41Q5SVQ8 909 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 PDXDC1Q6P996 788 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 FBXL6Q8N531 539 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 MYADMQ96S97 322 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 TUBGCP4Q9UGJ1 667 aa18.74■□□□□ 0.59
HMGN3-203ENST00000620514 TRAPPC3O43617 180 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 GBP2P32456 591 aaPredicted RBP18.73■□□□□ 0.59
HMGN3-203ENST00000620514 RAB33AQ14088 237 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 SLC39A4Q6P5W5 647 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 UBALD2Q8IYN6 164 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 CDY1Q9Y6F8 540 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 MUC6Q6W4X9 2439 aa18.73■□□□□ 0.59
HMGN3-203ENST00000620514 PDCD11Q14690 1871 aaKnown RBP18.72■□□□□ 0.59
HMGN3-203ENST00000620514 HNRNPDLO14979 420 aaKnown RBP18.72■□□□□ 0.59
HMGN3-203ENST00000620514 PIGRP01833 764 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 C8AP07357 584 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 CLTAP09496 248 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 VCPP55072 806 aaKnown RBP18.72■□□□□ 0.59
HMGN3-203ENST00000620514 SLC39A14Q15043 492 aa18.72■□□□□ 0.59
HMGN3-203ENST00000620514 ZC2HC1CQ53FD0 456 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms