RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 N4BP1O75113 896 aaKnown RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 EOMESO95936 686 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 CXCL8P10145 99 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 ITGA4P13612 1032 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 RAG1P15918 1043 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 TNNI1P19237 187 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 ITGB8P26012 769 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 CDC25BP30305 580 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 GCLMP48507 274 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 FMO5P49326 533 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 RAB27AP51159 221 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 YARSP54577 528 aaKnown RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 CETN1Q12798 172 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 KRT39Q6A163 491 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 GBP6Q6ZN66 633 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 C15orf39Q6ZRI6 1047 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 SLC24A5Q71RS6 500 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 SV2AQ7L0J3 742 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 ECHDC2Q86YB7 292 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 NT5DC4Q86YG4 428 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 WDR49Q8IV35 697 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 CACTINQ8WUQ7 758 aaKnown RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 PGBD4Q96DM1 585 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 CGRRF1Q99675 332 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 NXF3Q9H4D5 531 aaKnown RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM8AQ9HCN3 771 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 C1orf112Q9NSG2 853 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 PARP2Q9UGN5 583 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 LHX6Q9UPM6 363 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 GIT1Q9Y2X7 761 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 COQ4Q9Y3A0 265 aa8.69□□□□□ -1.02
CPNE3-209ENST00000620393 TRIP12Q14669 1992 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-209ENST00000620393 BRCA2P51587 3418 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 RECQL4O94761 1208 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 KCNE1P15382 129 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 AKAP5P24588 427 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 SYCP1Q15431 976 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 ZBTB6Q15916 424 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 PTPN21Q16825 1174 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 TCTN1Q2MV58 587 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 ZACNQ401N2 412 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 SPECC1LQ69YQ0 1117 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 DPY19L2P1Q6NXN4 242 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 AGMOQ6ZNB7 445 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 TRAPPC11Q7Z392 1133 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 DEFB128Q7Z7B8 93 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
CPNE3-209ENST00000620393 DRC7Q8IY82 874 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 RPUSD2Q8IZ73 545 aaKnown RBP8.68□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM199Q8N511 208 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 OR5B17Q8NGF7 314 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 LMO3Q8TAP4 145 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 LINC01599Q8WXQ3 324 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 VWCEQ96DN2 955 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 SNX27Q96L92 541 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 CRACR2AQ9BSW2 395 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 HTATIP2Q9BUP3 242 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 NUP58Q9BVL2 599 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 ELAC1Q9H777 363 aaKnown RBP8.68□□□□□ -1.02
CPNE3-209ENST00000620393 MMRN2Q9H8L6 949 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 UBN1Q9NPG3 1134 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 PRDM5Q9NQX1 630 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-209ENST00000620393 TOPORSQ9NS56 1045 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-209ENST00000620393 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 SIK3Q9Y2K2 1263 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 DERAQ9Y315 318 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 C2CD2Q9Y426 696 aa8.68□□□□□ -1.02
CPNE3-209ENST00000620393 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 ATF7P17544 494 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 SLC9A1P19634 815 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 PON1P27169 355 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 MYH11P35749 1972 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 MXI1P50539 228 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 TFAMQ00059 246 aaKnown RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 MYL7Q01449 175 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 PTPRJQ12913 1337 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 TBX2Q13207 712 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 IKBKEQ14164 716 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 TMEM132DQ14C87 1099 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 EPC2Q52LR7 807 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 FIGNQ5HY92 759 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 LMBRD2Q68DH5 695 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-209ENST00000620393 JADE1Q6IE81 842 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 CNKSR3Q6P9H4 555 aa8.67□□□□□ -1.02
CPNE3-209ENST00000620393 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms