RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SH3GL2Q99962 352 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PIF1Q9H611 641 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 LRRC4Q9HBW1 653 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 NOD1Q9Y239 953 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 HNRNPRO43390 633 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 RAD51CO43502 376 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SORBS3O60504 671 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 FCER1AP12319 257 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZNF16P17020 682 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 DRD4P21917 467 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 VPS72Q15906 364 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SLC18A3Q16572 532 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 HIF1AQ16665 826 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ARMCX2Q7L311 632 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 DDX42Q86XP3 938 aaKnown RBP eCLIP3.22□□□□□ -1.89
LPP-221ENST00000618621 BHMT2Q9H2M3 363 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZWILCHQ9H900 591 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RXFP1Q9HBX9 757 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CLASP1Q7Z460 1538 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 C16orf96A6NNT2 1141 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 POTECB2RU33 542 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PCSK2P16519 638 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SFNP31947 248 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PSMC1P62191 440 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 KCTD2Q14681 263 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 GRAMD1BQ3KR37 738 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 XRRA1Q6P2D8 792 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 KIF2BQ8N4N8 673 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 MREGQ8N565 214 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 APBB2Q92870 758 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TGS1Q96RS0 853 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 TSSK1BQ9BXA7 367 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 MLXIPLQ9NP71 852 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 WDR35Q9P2L0 1181 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 BDNFP23560 247 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CUL3Q13618 768 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 MAPK6Q16659 721 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 C12orf60Q5U649 245 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TERB1Q8NA31 727 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 OPTNQ96CV9 577 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 L3MBTL1Q9Y468 752 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZBTB24O43167 697 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 CDH16O75309 829 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PAX7P23759 505 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PMS1P54277 932 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 GSCP56915 257 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 NFIXQ14938 502 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 MEA1Q16626 185 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 LINC00116Q8NCU8 138 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TTC17Q96AE7 1141 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CYTH2Q99418 400 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TRPV6Q9H1D0 765 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 UPF3AQ9H1J1 476 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 VCPKMTQ9H867 229 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 C17orf75Q9HAS0 396 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZNF609O15014 1411 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SAMD9LQ8IVG5 1584 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 NPHP3-ACAD11A0A0J9YXS1 232 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CES2O00748 559 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 ZBED1O96006 694 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 HADHAP40939 763 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PPP4CP60510 307 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CENPCQ03188 943 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RELL1Q8IUW5 271 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 IQCKQ8N0W5 287 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 MAGEC3Q8TD91 643 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SCG3Q8WXD2 468 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 HSPH1Q92598 858 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 FAM192AQ9GZU8 254 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RANBP17Q9H2T7 1088 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 GOLGA8IPA6NC78 632 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 GOLGA8JA6NMD2 632 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 KPNA7A9QM74 516 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 GALCP54803 685 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 OCRLQ01968 901 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 C1orf228Q6PIY5 440 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 LRRC34Q8IZ02 419 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 THEM5Q8N1Q8 247 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 RIBC1Q8N443 379 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 KLC2Q9H0B6 622 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 AIPL1Q9NZN9 384 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 AP4S1Q9Y587 144 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PTPRUQ92729 1446 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 A0A0A6YYK5 440 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 CHEK2O96017 543 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SERPINB9P50453 376 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 OR6B2Q6IFH4 312 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PTF1AQ7RTS3 328 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 CCNYQ8ND76 341 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 VPS37AQ8NEZ2 397 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 SKA2Q8WVK7 121 aaPredicted RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 C1orf54Q8WWF1 131 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 PABPC3Q9H361 631 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 NDUFA13Q9P0J0 144 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 A0A0U1RQJ8 604 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 FAM170AA1A519 330 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 H0Y626 953 aa3.22□□□□□ -1.89
LPP-221ENST00000618621 TRDMT1O14717 391 aaKnown RBP3.22□□□□□ -1.89
LPP-221ENST00000618621 ARHGEF9O43307 516 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms