RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DLG4P78352 724 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 TFAMQ00059 246 aaKnown RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 CLLU1OSQ5K130 101 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 RASIP1Q5U651 963 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 JADE1Q6IE81 842 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 PLEKHO2Q8TD55 490 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 SLC35C1Q96A29 364 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 ANKRD36BP1Q96IX9 119 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 POP1Q99575 1024 aaKnown RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 RNF19AQ9NV58 838 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 INTS13Q9NVM9 706 aa15.92■□□□□ 0.14
CD48-203ENST00000613788 CXXC1Q9P0U4 656 aaPredicted RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 UBQLN1Q9UMX0 589 aaKnown RBP15.92■□□□□ 0.14
CD48-203ENST00000613788 MICAL3Q7RTP6 2002 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 PTGESO14684 152 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 SERPINC1P01008 464 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 TNNC2P02585 160 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 AFPP02771 609 aaKnown RBP15.91■□□□□ 0.14
CD48-203ENST00000613788 TMEM191BP0C7N4 346 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 TRIM49P0CI25 452 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 TRIM49CP0CI26 452 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 ATP1A3P13637 1013 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 SCNN1GP51170 649 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 KCNH2Q12809 1159 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 GRIK3Q13003 919 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 KRT31Q15323 416 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 ZBTB6Q15916 424 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 GLRA4Q5JXX5 417 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 GSTCDQ8NEC7 633 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 BEST2Q8NFU1 509 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
CD48-203ENST00000613788 ZMAT2Q96NC0 199 aaKnown RBP15.91■□□□□ 0.14
CD48-203ENST00000613788 CASD1Q96PB1 797 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 ZBED2Q9BTP6 218 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 MRPL9Q9BYD2 267 aaKnown RBP15.91■□□□□ 0.14
CD48-203ENST00000613788 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 TTC3P53804 2025 aa15.91■□□□□ 0.14
CD48-203ENST00000613788 TBKBP1A7MCY6 615 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 N4BP1O75113 896 aaKnown RBP15.9■□□□□ 0.14
CD48-203ENST00000613788 GJB5O95377 273 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 POMCP01189 267 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 NFICP08651 508 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
CD48-203ENST00000613788 CYP3A5P20815 502 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 BMP8BP34820 402 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 RNASELQ05823 741 aaKnown RBP15.9■□□□□ 0.14
CD48-203ENST00000613788 SHHQ15465 462 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 VWA3BQ502W6 1294 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 C1orf220Q5T0J3 134 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 EFCAB13Q8IY85 973 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
CD48-203ENST00000613788 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
CD48-203ENST00000613788 CXCL16Q9H2A7 254 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 NDST4Q9H3R1 872 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 TMEM8AQ9HCN3 771 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 TAB2Q9NYJ8 693 aa15.9■□□□□ 0.14
CD48-203ENST00000613788 PES1O00541 588 aaKnown RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 GCLMP48507 274 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 AFF1P51825 1210 aaKnown RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 PPP3CAQ08209 521 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 CETN1Q12798 172 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 LMBRD2Q68DH5 695 aaPredicted RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 KRT39Q6A163 491 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 HERC6Q8IVU3 1022 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 OR5B17Q8NGF7 314 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 ZNF516Q92618 1163 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 ZNF689Q96CS4 500 aaPredicted RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 YME1L1Q96TA2 773 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 VPS16Q9H269 839 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 MMRN2Q9H8L6 949 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 TBC1D13Q9NVG8 400 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 DPP3Q9NY33 737 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 INSL6Q9Y581 213 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 P4HA2O15460 535 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 PHACTR2O75167 634 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 FMO5P49326 533 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 GATMP50440 423 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 MXI1P50539 228 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 FANCCQ00597 558 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 BIRC3Q13489 604 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 SV2AQ7L0J3 742 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 TRAPPC11Q7Z392 1133 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
CD48-203ENST00000613788 RAD9AQ99638 391 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 ITGA11Q9UKX5 1188 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 PLAGL2Q9UPG8 496 aa15.89■□□□□ 0.13
CD48-203ENST00000613788 PTPRJQ12913 1337 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 GOLGA6L3A6NEY3 463 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 PMM2O15305 246 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 HTRA4P83105 476 aaPredicted RBP15.88■□□□□ 0.13
CD48-203ENST00000613788 PLCB2Q00722 1185 aa15.88■□□□□ 0.13
CD48-203ENST00000613788 TUSC3Q13454 348 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms