RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GFAPP14136 432 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 RBBP7Q16576 425 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 SENP7Q9BQF6 1050 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF229Q9UJW7 825 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 CASP1P29466 404 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 MRPL28Q13084 256 aaKnown RBP18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 C16orf89Q6UX73 402 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 ANKS3Q6ZW76 656 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 SP8Q8IXZ3 490 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 ZNF555Q8NEP9 628 aa18.33■□□□□ 0.53
HMGXB3-206ENST00000613459 DPYSL4O14531 572 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 BNIP3LO60238 219 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 VEPH1Q14D04 833 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 LONP2Q86WA8 852 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 C18orf8Q96DM3 657 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 WRNIP1Q96S55 665 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 PHF20Q9BVI0 1012 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 TCP11X1B4DZS4 312 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 CYP27B1O15528 508 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 KLHL2O95198 593 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 KCNA1Q09470 495 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 EFL1Q7Z2Z2 1120 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 ZNF677Q86XU0 584 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 HOMEZQ8IX15 550 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 SYN2Q92777 582 aaPredicted RBP18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 ZNF711Q9Y462 761 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 ANGPT2O15123 496 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 FCER1AP12319 257 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 KCNA2P16389 499 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 VSNL1P62760 191 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 KRT72Q14CN4 511 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 CNGA3Q16281 694 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 MKNK1Q9BUB5 465 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 OLFML3Q9NRN5 406 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 GJB4Q9NTQ9 266 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 CDV3Q9UKY7 258 aaKnown RBP18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 BLOC1S6Q9UL45 172 aa18.33■□□□□ 0.52
HMGXB3-206ENST00000613459 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 TDP2O95551 362 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 XKR3Q5GH77 459 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 ARHGEF26Q96DR7 871 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 MED15Q96RN5 788 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 HLA-DPA1P20036 260 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 PID1Q7Z2X4 250 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 C1orf54Q8WWF1 131 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 PSD3Q9NYI0 1048 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 USP15Q9Y4E8 981 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 GPSM2P81274 684 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 RBP5P82980 135 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 CENPCQ03188 943 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 DPYDQ12882 1025 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 DDX28Q9NUL7 540 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 NLRP11P59045 1033 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 KLC1Q07866 573 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 APLFQ8IW19 511 aaPredicted RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 AFG1LQ8WV93 481 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 KIF12Q96FN5 646 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 TDRD3Q9H7E2 651 aaKnown RBP18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 ABCC3O15438 1527 aa18.32■□□□□ 0.52
HMGXB3-206ENST00000613459 HOXD10P28358 340 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 TPI1P60174 286 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 RABL6Q3YEC7 729 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 DDIASQ8IXT1 998 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 OR6P1Q8NGX9 317 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 THAP11Q96EK4 314 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 TBC1D23Q9NUY8 699 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 TRAPPC3O43617 180 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 ZNF746Q6NUN9 644 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 TEKT4Q8WW24 435 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 CHN1P15882 459 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 NAB2Q15742 525 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 RRM2BQ7LG56 351 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 ADCK1Q86TW2 530 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 CATSPER3Q86XQ3 398 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 CALML6Q8TD86 181 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 PDCD6IPQ8WUM4 868 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 JPH1Q9HDC5 661 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 MTO1Q9Y2Z2 717 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 PRKCBP05771 671 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 FGFR4P22455 802 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 ADORA2BP29275 332 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 CARSP49589 748 aaKnown RBP18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 LPAR1Q92633 364 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 FAM95CA0A1B0GW59 222 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
HMGXB3-206ENST00000613459 NEMP1O14524 444 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms