RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NPAS4Q8IUM7 802 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 FAM114A1Q8IWE2 563 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 FNBP1Q96RU3 617 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 GDF15Q99988 308 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 TUBGCP4Q9UGJ1 667 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLK4-215ENST00000611733 TTC3P53804 2025 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
CLK4-215ENST00000611733 LRRC10BA6NIK2 292 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 AMHP03971 560 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
CLK4-215ENST00000611733 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
CLK4-215ENST00000611733 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
CLK4-215ENST00000611733 CLDN10P78369 228 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 FANCCQ00597 558 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 NAB2Q15742 525 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
CLK4-215ENST00000611733 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 HACE1Q8IYU2 909 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 CGRRF1Q99675 332 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 ASB7Q9H672 318 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
CLK4-215ENST00000611733 TEX33O43247 280 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 DGKIO75912 1065 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 DDHD2O94830 711 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 IL18RAPO95256 599 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 C4BPAP04003 597 aaKnown RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 KCNE1P15382 129 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 KCNJ6P48051 423 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 RASIP1Q5U651 963 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 FAM109BQ6ICB4 259 aaPredicted RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLK4-215ENST00000611733 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 CST3P01034 146 aaPredicted RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 TDRD10Q5VZ19 366 aaKnown RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 PAAF1Q9BRP4 392 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
CLK4-215ENST00000611733 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
CLK4-215ENST00000611733 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
CLK4-215ENST00000611733 PPEF2O14830 753 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 EFCAB14O75071 495 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 VNN1O95497 513 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 SERPINC1P01008 464 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 TPM4P67936 248 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 C15orf39Q6ZRI6 1047 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
CLK4-215ENST00000611733 WDR49Q8IV35 697 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 CXorf38Q8TB03 319 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 ZNF689Q96CS4 500 aaPredicted RBP13.04□□□□□ -0.32
CLK4-215ENST00000611733 RPS6KC1Q96S38 1066 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 TBC1D13Q9NVG8 400 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 ANK1P16157 1881 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 INPPL1O15357 1258 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
CLK4-215ENST00000611733 THP07101 528 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 FMO5P49326 533 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 RABGGTBP53611 331 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 APBA1Q02410 837 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 SURF1Q15526 300 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 CD302Q8IX05 232 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
CLK4-215ENST00000611733 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 C2CD2Q9Y426 696 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 CEP290O15078 2479 aa13.04□□□□□ -0.32
CLK4-215ENST00000611733 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 CASTOR2A6NHX0 329 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 F8W810 466 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 GJB5O95377 273 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
CLK4-215ENST00000611733 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms