RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 PSMD5Q16401 504 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 PDXDC1Q6P996 788 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 TRIM67Q6ZTA4 783 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 CCDC149Q6ZUS6 474 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 PALB2Q86YC2 1186 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 MYCT1Q8N699 235 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 TDRD5Q8NAT2 981 aaKnown RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 C3orf58Q8NDZ4 430 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 DDX27Q96GQ7 796 aaKnown RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 CLSTN3Q9BQT9 956 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 HAPLN2Q9GZV7 340 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 ZDHHC7Q9NXF8 308 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 TBX20Q9UMR3 447 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 HCN4Q9Y3Q4 1203 aa14.09□□□□□ -0.15
SNX20-205ENST00000610485 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
SNX20-205ENST00000610485 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 K7ENM7 598 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 TBCAO75347 108 aaKnown RBP14.08□□□□□ -0.16
SNX20-205ENST00000610485 RFPL2O75678 378 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 ABCD1P33897 745 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 TXLNAP40222 546 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 NASPP49321 788 aaPredicted RBP14.08□□□□□ -0.16
SNX20-205ENST00000610485 SLC10A6Q3KNW5 377 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 SEZ6Q53EL9 994 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 HFE2Q6ZVN8 426 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 BMP8AQ7Z5Y6 402 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 CEP57Q86XR8 500 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 ZNF707Q96C28 371 aaPredicted RBP14.08□□□□□ -0.16
SNX20-205ENST00000610485 BICD1Q96G01 975 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 PLXNA3P51805 1871 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 DENND4AQ7Z401 1863 aa14.08□□□□□ -0.16
SNX20-205ENST00000610485 TMEM221A6NGB7 291 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 M0R296 226 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 PODXLO00592 558 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 HNRNPDLO14979 420 aaKnown RBP14.07□□□□□ -0.16
SNX20-205ENST00000610485 TRAPPC3O43617 180 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 FAM189A1O60320 539 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 CLTAP09496 248 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 SPATA31D3P0C874 917 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 RPL9P32969 192 aaKnown RBP14.07□□□□□ -0.16
SNX20-205ENST00000610485 LIG4P49917 911 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 GTF2BQ00403 316 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 SIGLEC14Q08ET2 396 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 RRAGBQ5VZM2 374 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 SPATA31D4Q6ZUB0 917 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 MAP4K3Q8IVH8 894 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 HSCBQ8IWL3 235 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
SNX20-205ENST00000610485 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 C18orf25Q96B23 403 aaPredicted RBP14.07□□□□□ -0.16
SNX20-205ENST00000610485 ST6GALNAC4Q9H4F1 302 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 WDR6Q9NNW5 1121 aaKnown RBP14.07□□□□□ -0.16
SNX20-205ENST00000610485 MTRRQ9UBK8 725 aa14.07□□□□□ -0.16
SNX20-205ENST00000610485 TTC26A0AVF1 554 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 I3L4J1 428 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 ADAM12O43184 909 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 ZMYND10O75800 440 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 CXCL8P10145 99 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 MYBP10242 640 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
SNX20-205ENST00000610485 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
SNX20-205ENST00000610485 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNX20-205ENST00000610485 BRCC3P46736 316 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 RAB33AQ14088 237 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 KYAT1Q16773 422 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 SLC39A4Q6P5W5 647 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 ANKS3Q6ZW76 656 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 OTOP3Q7RTS5 596 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 LINC00301Q8NCQ3 95 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
SNX20-205ENST00000610485 ACSF2Q96CM8 615 aaPredicted RBP14.06□□□□□ -0.16
SNX20-205ENST00000610485 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 ZHX3Q9H4I2 956 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 SORCS3Q9UPU3 1222 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.06□□□□□ -0.16
SNX20-205ENST00000610485 BACE2Q9Y5Z0 518 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 CLUHO75153 1309 aa14.06□□□□□ -0.16
SNX20-205ENST00000610485 A0A087X0B3 334 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 A0A0B4J269 797 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 MYMKA6NI61 221 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 OGTO15294 1046 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 ADRB2P07550 413 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
SNX20-205ENST00000610485 TNFSF9P41273 254 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 ZBTB6Q15916 424 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 RSPO2Q6UXX9 243 aaPredicted RBP14.05□□□□□ -0.16
SNX20-205ENST00000610485 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 SV2BQ7L1I2 683 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 DYMQ7RTS9 669 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 SFR1Q86XK3 245 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 UBALD2Q8IYN6 164 aa14.05□□□□□ -0.16
SNX20-205ENST00000610485 DDX12PQ92771 950 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms