RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 KRT4P19013 534 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 DDCP20711 480 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 SLC6A2P23975 617 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 SLC16A1P53985 500 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 KIF23Q02241 960 aaPredicted RBP5.89□□□□□ -1.47
HDDC2-207ENST00000608532 CREMQ03060 361 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 UBXN2BQ14CS0 331 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PTPN21Q16825 1174 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 METRNLQ641Q3 311 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 MIGA2Q7L4E1 593 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 RSPH3Q86UC2 560 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 CASKIN2Q8WXE0 1202 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PRRX2Q99811 253 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDH12Q9NPG4 1184 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 SLC23A1Q9UHI7 598 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA9Q9Y5G4 932 aaKnown RBP5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA8Q9Y5G5 932 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA7Q9Y5G6 932 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA6Q9Y5G7 932 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA3Q9Y5H0 932 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 FPGT-TNNI3KV9GXZ4 949 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 TCRBV7S2A1N4TA0A589 114 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 SUV39H1O43463 412 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 HLA-DOAP06340 250 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 CCND1P24385 295 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 DDX6P26196 483 aaKnown RBP eCLIP5.88□□□□□ -1.47
HDDC2-207ENST00000608532 MXRA7P84157 204 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 RESTQ13127 1097 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 MTM1Q13496 603 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 BEAN1Q3B7T3 259 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 AGAP9Q5VTM2 703 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 OTUD7BQ6GQQ9 843 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 Q6ZPA2 131 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 TEKT5Q96M29 485 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 ZSWIM1Q9BR11 485 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 WDR11Q9BZH6 1224 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 SLITRK6Q9H5Y7 841 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 CYP4F11Q9HBI6 524 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 TDP1Q9NUW8 608 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 FBXO34Q9NWN3 711 aa5.88□□□□□ -1.47
HDDC2-207ENST00000608532 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 GUCY1B3Q02153 619 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 EFCAB2Q5VUJ9 269 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 SEM1Q6ZVN7 128 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
HDDC2-207ENST00000608532 HDAC10Q969S8 669 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 SERHL2Q9H4I8 314 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 GSTO2Q9H4Y5 243 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 KLHL11Q9NVR0 708 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 HS3ST4Q9Y661 456 aa5.87□□□□□ -1.47
HDDC2-207ENST00000608532 AATKQ6ZMQ8 1374 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 WASHC2CQ9Y4E1 1318 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 CCDC154A6NI56 674 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 FOXN1O15353 648 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 PRSS23O95084 383 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 ALAS1P13196 640 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 TP53BP2Q13625 1128 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 IL10RAQ13651 578 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 ATP2B3Q16720 1220 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 UAP1L1Q3KQV9 507 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 SPDYE7PQ495Y7 208 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 CRB2Q5IJ48 1285 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 MAPKAPK5Q8IW41 473 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 CMTR2Q8IYT2 770 aaKnown RBP5.86□□□□□ -1.47
HDDC2-207ENST00000608532 RNF31Q96EP0 1072 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 RNF181Q9P0P0 153 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 DMRT1Q9Y5R6 373 aa5.86□□□□□ -1.47
HDDC2-207ENST00000608532 TNKSO95271 1327 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 A0A1B0GTW7 788 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 CDHR4A6H8M9 788 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 ANKRD62A6NC57 917 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 FZD9O00144 591 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 B3GALT2O43825 422 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 BMPR1AP36894 532 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 WASP42768 502 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 HSD11B2P80365 405 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 TARDBPQ13148 414 aaKnown RBP eCLIP5.85□□□□□ -1.47
HDDC2-207ENST00000608532 PTPROQ16827 1216 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 C3orf36Q3SXR2 165 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 ARHGEF19Q8IW93 802 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 TBC1D15Q8TC07 691 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 KAT5Q92993 513 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 C11orf54Q9H0W9 315 aaPredicted RBP5.85□□□□□ -1.47
HDDC2-207ENST00000608532 RNPEPQ9H4A4 650 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 USP25Q9UHP3 1055 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 NOX1Q9Y5S8 564 aa5.85□□□□□ -1.47
HDDC2-207ENST00000608532 HTRA2O43464 458 aaPredicted RBP5.84□□□□□ -1.47
HDDC2-207ENST00000608532 SPDEFO95238 335 aa5.84□□□□□ -1.47
HDDC2-207ENST00000608532 GCP02774 474 aa5.84□□□□□ -1.47
HDDC2-207ENST00000608532 CFIP05156 583 aa5.84□□□□□ -1.47
HDDC2-207ENST00000608532 ELANEP08246 267 aa5.84□□□□□ -1.47
HDDC2-207ENST00000608532 IBSPP21815 317 aaPredicted RBP5.84□□□□□ -1.47
HDDC2-207ENST00000608532 FGFR4P22455 802 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms